Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69676 | Canola | plastid | 94.04 | 93.46 |
| AT5G13030.1 | Thale cress | plastid | 88.4 | 89.1 |
| CDX78502 | Canola | plastid | 82.45 | 84.84 |
| CDX70490 | Canola | plastid | 83.86 | 84.38 |
| VIT_06s0004g01360.t01 | Wine grape | cytosol | 71.63 | 79.34 |
| GSMUA_Achr3P11720_001 | Banana | cytosol | 70.06 | 78.42 |
| HORVU7Hr1G046290.3 | Barley | cytosol | 66.46 | 78.37 |
| Solyc01g006490.2.1 | Tomato | cytosol | 70.06 | 77.87 |
| PGSC0003DMT400082019 | Potato | cytosol | 69.75 | 77.53 |
| GSMUA_Achr7P06390_001 | Banana | cytosol | 63.64 | 75.05 |
| KRG93074 | Soybean | nucleus | 68.81 | 74.41 |
| Solyc12g100200.1.1 | Tomato | plastid | 68.81 | 71.04 |
| TraesCS7A01G227000.1 | Wheat | mitochondrion | 68.03 | 70.23 |
| TraesCS7D01G227400.2 | Wheat | mitochondrion | 67.87 | 70.06 |
| TraesCS7B01G192600.1 | Wheat | mitochondrion | 67.55 | 69.74 |
| Os06t0320700-01 | Rice | plasma membrane | 68.34 | 69.65 |
| Zm00001d045897_P003 | Maize | plastid | 69.44 | 68.79 |
| OQU76338 | Sorghum | mitochondrion | 64.11 | 60.59 |
Protein Annotations
| EnsemblPlants:CDX97219 | EnsemblPlantsGene:GSBRNA2T00104220001 | HAMAP:MF_00692 | InterPro:UPF0061 | PANTHER:PTHR32057 | PFAM:PF02696 |
| ProteinID:CDX97219 | ProteinID:CDX97219.1 | SEG:seg | UniParc:UPI0004EE4B14 | MapMan:35.2 | : |
Description
BnaC09g44060D
Coordinates
chrLK031897:+:1243924..1246925
Molecular Weight (calculated)
71368.6 Da
IEP (calculated)
6.219
GRAVY (calculated)
-0.402
Length
638 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLRVCSPPS SFFYLRPLHL LTSSSKLQFS PSLRRESRLI PSRSSSSFRR MESSPASSSS QTPVTASETD SLAKDLQNQN LGASVDEGGA KIKRKLEDFN
101: WNHSFVKELP GDPRSDVTSR EVLHACYSKV SPSVPVDDPQ LVAWSDSVAE LLELDPKEFE RPDFPLLLSG AKPLPGAMPY AQCYGGHQFG MWAGQLGDGR
201: AITLGEVLNS KGERWELQLK GAGKTPYSRF ADGLAVLRSS IREFLCSEAM HFLGIPTTRA LCLLTTGQDV TRDMFYDGNP KEEPGAIVCR VSQSFLRFGS
301: YQIHASRGKE DLEIVRKLAD YAIKHHFPHI ESMNRSDDSL SFITGKEDDS VVDLTSNKYA AWVVEIAERT ATLVARWQGV GFTHGVLNTD NMSILGQTID
401: YGPFGFLDAF DPSFTPNTTD LPGRRYCFAN QPDIGLWNIA QFAKSLAVAE LINQKEANYA MERYGDKFMD EYQAIMSKKL GLSKYNKDII SKLLNNMAVD
501: KVDYTNFFRL LSNVKADPNT PEDELLKPLK AALLDIGKER KEAWIKWVQA YIQEVSGGDT SDEERKARMD SVNPKYILRN YLCQSAIDAA EQGDFSEVNN
601: LIRLMKNPYE DQPGMQKYAR LPPAWAYRPG VCMLSCSS
101: WNHSFVKELP GDPRSDVTSR EVLHACYSKV SPSVPVDDPQ LVAWSDSVAE LLELDPKEFE RPDFPLLLSG AKPLPGAMPY AQCYGGHQFG MWAGQLGDGR
201: AITLGEVLNS KGERWELQLK GAGKTPYSRF ADGLAVLRSS IREFLCSEAM HFLGIPTTRA LCLLTTGQDV TRDMFYDGNP KEEPGAIVCR VSQSFLRFGS
301: YQIHASRGKE DLEIVRKLAD YAIKHHFPHI ESMNRSDDSL SFITGKEDDS VVDLTSNKYA AWVVEIAERT ATLVARWQGV GFTHGVLNTD NMSILGQTID
401: YGPFGFLDAF DPSFTPNTTD LPGRRYCFAN QPDIGLWNIA QFAKSLAVAE LINQKEANYA MERYGDKFMD EYQAIMSKKL GLSKYNKDII SKLLNNMAVD
501: KVDYTNFFRL LSNVKADPNT PEDELLKPLK AALLDIGKER KEAWIKWVQA YIQEVSGGDT SDEERKARMD SVNPKYILRN YLCQSAIDAA EQGDFSEVNN
601: LIRLMKNPYE DQPGMQKYAR LPPAWAYRPG VCMLSCSS
001: MLLRVCCPSS FFYLRPLHLF SSTAKVPFCP SLPRQFRLSP SRSSSFRRME SSPASSSSPT PVTDSSADSL AKDLQNQSLG AVDEGVKIKK KLEDFNWDHS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
Arabidopsis Description
Selenoprotein O [Source:UniProtKB/TrEMBL;Acc:Q8H126]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.