Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g006490.2.1 | Tomato | cytosol | 77.02 | 82.93 |
| VIT_06s0004g01360.t01 | Wine grape | cytosol | 73.62 | 78.99 |
| HORVU7Hr1G046290.3 | Barley | cytosol | 67.96 | 77.63 |
| GSMUA_Achr3P11720_001 | Banana | cytosol | 69.58 | 75.44 |
| GSMUA_Achr7P06390_001 | Banana | cytosol | 64.4 | 73.57 |
| KRG93074 | Soybean | nucleus | 69.42 | 72.71 |
| Bra006176.1-P | Field mustard | cytosol | 67.31 | 72.6 |
| TraesCS7A01G227000.1 | Wheat | mitochondrion | 69.58 | 69.58 |
| TraesCS7D01G227400.2 | Wheat | mitochondrion | 69.58 | 69.58 |
| TraesCS7B01G192600.1 | Wheat | mitochondrion | 69.26 | 69.26 |
| Os06t0320700-01 | Rice | plasma membrane | 69.9 | 69.01 |
| CDX97219 | Canola | plastid | 71.04 | 68.81 |
| AT5G13030.1 | Thale cress | plastid | 69.58 | 67.93 |
| Bra008862.1-P | Field mustard | plastid | 70.55 | 67.91 |
| CDX69676 | Canola | plastid | 70.39 | 67.76 |
| CDX78502 | Canola | plastid | 67.96 | 67.74 |
| Zm00001d045897_P003 | Maize | plastid | 70.39 | 67.55 |
| CDX70490 | Canola | plastid | 67.15 | 65.46 |
| OQU76338 | Sorghum | mitochondrion | 64.72 | 59.26 |
Protein Annotations
| EnsemblPlants:Solyc12g100200.1.1 | EnsemblPlantsGene:Solyc12g100200.1 | HAMAP:MF_00692 | InterPro:UPF0061 | PANTHER:PTHR32057 | PFAM:PF02696 |
| SEG:seg | UniParc:UPI000276AB75 | UniProt:K4DI41 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr12:-:67015293..67020830
Molecular Weight (calculated)
69524.7 Da
IEP (calculated)
6.120
GRAVY (calculated)
-0.320
Length
618 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSLSHTSS STTAFFLSSS AKFLRPRFSS CPFQFPIHQK RHRSLFSHST AASMDSAATV DSVADDLKKQ NLKGVEIKLK LNLEELNWDN SFVRELPGDP
101: RSDSIPREVL HACYTKVLPS VPVNNPQLVA WSESVAELLE LDPREFERPD FPLIFSGASP LVGAIPYAQN YGGHQFGMWA GQLGDGRAIT LGEILNSKSQ
201: RWELQLKGAG KTPYSRFADG LAVLRSSIRE FLCSEAMHGL GIPTTRALCL VTTGKDVMRD MFYDGNPKDE PGAIVCRVAQ SFLRFGSYQL HASRGKKDFE
301: LVRALADYAI RYHFPHLENM TRSESISANT DVDLTSNKYA AWAVEVAERT ASMIARWQDV GFTHGVMNTD NMSVLGLTID YGPFGFLDSF DPSYTPNTTD
401: LPGRRYCFAN QPDVGLWNIA QFTSALSTAE LLSDKEADYA MERYGNKFMD DYQDIMTRKL GLTKYNKKLI GELLKNMVSD KVDYTNFFRS LSNIKADPAI
501: PEDQLLIPLK DVLLDIGMER REAWTNWIKS YIQELSTTGV LDEERKVSMN FVNPKYILRN YLCQNAIDAA EQGDFEEVRQ LLKVMQCPFD EQPGMEKYAR
601: LPPAWAHRPG VCMLSCSS
101: RSDSIPREVL HACYTKVLPS VPVNNPQLVA WSESVAELLE LDPREFERPD FPLIFSGASP LVGAIPYAQN YGGHQFGMWA GQLGDGRAIT LGEILNSKSQ
201: RWELQLKGAG KTPYSRFADG LAVLRSSIRE FLCSEAMHGL GIPTTRALCL VTTGKDVMRD MFYDGNPKDE PGAIVCRVAQ SFLRFGSYQL HASRGKKDFE
301: LVRALADYAI RYHFPHLENM TRSESISANT DVDLTSNKYA AWAVEVAERT ASMIARWQDV GFTHGVMNTD NMSVLGLTID YGPFGFLDSF DPSYTPNTTD
401: LPGRRYCFAN QPDVGLWNIA QFTSALSTAE LLSDKEADYA MERYGNKFMD DYQDIMTRKL GLTKYNKKLI GELLKNMVSD KVDYTNFFRS LSNIKADPAI
501: PEDQLLIPLK DVLLDIGMER REAWTNWIKS YIQELSTTGV LDEERKVSMN FVNPKYILRN YLCQNAIDAA EQGDFEEVRQ LLKVMQCPFD EQPGMEKYAR
601: LPPAWAHRPG VCMLSCSS
001: MLLRVCCPSS FFYLRPLHLF SSTAKVPFCP SLPRQFRLSP SRSSSFRRME SSPASSSSPT PVTDSSADSL AKDLQNQSLG AVDEGVKIKK KLEDFNWDHS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
101: FVKELPGDPR TDVISREVLH ACYSKVSPSV EVDDPQLVAW SVSVAELLDL DPKEFERPDF PLMLSGAKPL PGAMSYAQCY GGHQFGMWAG QLGDGRAITL
201: GEVLNSKGER WELQLKGAGR TPYSRFADGL AVLRSSIREF LCSETMHCLG IPTTRALCLL TTGQNVTRDM FYDGNPKEEP GAIVCRVSQS FLRFGSYQIH
301: ASRGKEDLDI VRKLADYAIK HHFPHIESMD RSDSLSFKTG DEDDSVVDLT SNKYAAWIVE IAERTATLVA RWQGVGFTHG VLNTDNMSIL GQTIDYGPFG
401: FLDAFDPSYT PNTTDLPGRR YCFANQPDIG LWNIAQFSKT LAVAQLINQK EANYAMERYG DKFMDEYQAI MSKKLGLTKY NKEVISKLLN NMSVDKVDYT
501: NFFRLLANVK ANPNTPENEL LKPLKAVLLD IGKERKEAWI KWMRSYIQEV GGSEVSDEER KARMDSVNPK YILRNYLCQS AIDAAEQGDF SEVNNLIRLM
601: KRPYEEQPGM EKYARLPPAW AYRPGVCMLS CSS
Arabidopsis Description
Selenoprotein O [Source:UniProtKB/TrEMBL;Acc:Q8H126]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.