Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79568 | Canola | nucleus | 86.73 | 86.73 |
| Bra021923.1-P | Field mustard | cytosol | 69.03 | 66.67 |
| Bra005407.1-P | Field mustard | cytosol | 64.6 | 62.93 |
| AT2G34600.1 | Thale cress | nucleus | 62.83 | 47.97 |
| Bra010794.1-P | Field mustard | nucleus | 48.67 | 42.31 |
| PGSC0003DMT400022650 | Potato | cytosol | 42.48 | 41.74 |
| Solyc08g036640.2.1 | Tomato | nucleus | 40.71 | 41.07 |
| Solyc08g036620.2.1 | Tomato | nucleus | 36.28 | 39.81 |
| VIT_10s0003g03790.t01 | Wine grape | cytosol | 44.25 | 39.37 |
| Bra032362.1-P | Field mustard | nucleus | 46.02 | 39.1 |
| VIT_04s0008g00110.t01 | Wine grape | cytosol | 33.63 | 38.78 |
| VIT_10s0003g03810.t01 | Wine grape | nucleus | 32.74 | 38.54 |
| PGSC0003DMT400002985 | Potato | cytosol | 38.94 | 37.93 |
| VIT_10s0003g03800.t01 | Wine grape | cytosol | 42.48 | 37.8 |
| PGSC0003DMT400002991 | Potato | nucleus | 35.4 | 37.74 |
| PGSC0003DMT400022651 | Potato | mitochondrion, nucleus | 38.94 | 35.48 |
| KRH58647 | Soybean | cytosol | 40.71 | 34.33 |
| Solyc08g036660.2.1 | Tomato | mitochondrion | 38.05 | 33.86 |
| KRH11175 | Soybean | cytosol | 39.82 | 33.83 |
| KRH42552 | Soybean | nucleus | 42.48 | 32.0 |
| KRH21078 | Soybean | cytosol | 38.94 | 31.88 |
| GSMUA_Achr9P10340_001 | Banana | cytosol | 32.74 | 29.13 |
| GSMUA_Achr7P01220_001 | Banana | extracellular | 27.43 | 26.05 |
| GSMUA_Achr4P31480_001 | Banana | nucleus | 34.51 | 25.83 |
| GSMUA_Achr6P31200_001 | Banana | nucleus | 33.63 | 25.5 |
| GSMUA_Achr2P12970_001 | Banana | cytosol | 28.32 | 23.53 |
| GSMUA_Achr7P01230_001 | Banana | nucleus | 30.97 | 16.59 |
| GSMUA_Achr3P23250_001 | Banana | cytosol | 23.89 | 15.17 |
Protein Annotations
Description
AT2G34600 (E=3e-027) JAZ7, TIFY5B | JAZ7 (JASMONATE-ZIM-DOMAIN PROTEIN 7)
Coordinates
chrA03:+:8073106..8073447
Molecular Weight (calculated)
13014.5 Da
IEP (calculated)
8.770
GRAVY (calculated)
-0.758
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMQSNCDLE LRLHHPPSYD SSSSEIPQPN QEPQICVPSD LIHLQAKAIL SLASRDMEER SDGSDPSIIP NNMNRVHHQK TSTKRSLRSF LQKRNVRIQA
101: SSPYRRFPIT LFM
101: SSPYRRFPIT LFM
001: MIIIIKNCDK PLLNFKEMEM QTKCDLELRL LTSSYDSDFH SSLDESSSSE ISQPKQESQI LTIFYNGHMC VSSDLTHLEA NAILSLASRD VEEKSLSLRS
101: SDGSDPPTIP NNSTRFHYQK ASMKRSLHSF LQKRSLRIQA TSPYHRYR
101: SDGSDPPTIP NNSTRFHYQK ASMKRSLHSF LQKRSLRIQA TSPYHRYR
Arabidopsis Description
TIFY 5BProtein TIFY 5B [Source:UniProtKB/Swiss-Prot;Acc:O64687]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.