Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43664 | Canola | nucleus | 54.73 | 68.07 |
| Bra021923.1-P | Field mustard | cytosol | 53.38 | 67.52 |
| Bra005407.1-P | Field mustard | cytosol | 49.32 | 62.93 |
| CDX84301 | Canola | cytosol | 49.32 | 62.93 |
| CDY17268 | Canola | cytosol | 49.32 | 62.93 |
| Bra022981.1-P | Field mustard | nucleus | 47.97 | 62.83 |
| CDX79568 | Canola | nucleus | 47.3 | 61.95 |
| CDX84639 | Canola | nucleus | 47.3 | 61.4 |
| AT1G30135.1 | Thale cress | nucleus | 47.3 | 53.44 |
| PGSC0003DMT400022650 | Potato | cytosol | 38.51 | 49.57 |
| Solyc08g036620.2.1 | Tomato | nucleus | 34.46 | 49.51 |
| PGSC0003DMT400002991 | Potato | nucleus | 34.46 | 48.11 |
| VIT_04s0008g00110.t01 | Wine grape | cytosol | 31.76 | 47.96 |
| Solyc08g036640.2.1 | Tomato | nucleus | 35.81 | 47.32 |
| VIT_10s0003g03790.t01 | Wine grape | cytosol | 38.51 | 44.88 |
| VIT_10s0003g03810.t01 | Wine grape | nucleus | 29.05 | 44.79 |
| VIT_10s0003g03800.t01 | Wine grape | cytosol | 37.16 | 43.31 |
| PGSC0003DMT400002985 | Potato | cytosol | 33.78 | 43.1 |
| PGSC0003DMT400022651 | Potato | mitochondrion, nucleus | 34.46 | 41.13 |
| Solyc08g036660.2.1 | Tomato | mitochondrion | 33.78 | 39.37 |
| KRH58647 | Soybean | cytosol | 33.78 | 37.31 |
| KRH21078 | Soybean | cytosol | 33.78 | 36.23 |
| KRH11175 | Soybean | cytosol | 31.76 | 35.34 |
| KRH42552 | Soybean | nucleus | 35.14 | 34.67 |
| GSMUA_Achr9P10340_001 | Banana | cytosol | 27.7 | 32.28 |
| GSMUA_Achr7P01220_001 | Banana | extracellular | 25.68 | 31.93 |
| GSMUA_Achr2P12970_001 | Banana | cytosol | 27.7 | 30.15 |
| GSMUA_Achr6P31200_001 | Banana | nucleus | 28.38 | 28.19 |
| GSMUA_Achr4P31480_001 | Banana | nucleus | 27.7 | 27.15 |
| GSMUA_Achr7P01230_001 | Banana | nucleus | 31.08 | 21.8 |
| GSMUA_Achr3P23250_001 | Banana | cytosol | 21.62 | 17.98 |
Protein Annotations
| MapMan:15.5.45 | EntrezGene:818025 | UniProt:A0A178VTT3 | ProteinID:AAC26695.1 | ProteinID:AEC08997.1 | ArrayExpress:AT2G34600 |
| EnsemblPlantsGene:AT2G34600 | RefSeq:AT2G34600 | TAIR:AT2G34600 | RefSeq:AT2G34600-TAIR-G | EnsemblPlants:AT2G34600.1 | TAIR:AT2G34600.1 |
| EMBL:BT010666 | EMBL:BT010963 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009611 | GO:GO:0009719 | GO:GO:0009753 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0031347 |
| GO:GO:1903507 | GO:GO:2000022 | InterPro:IPR010399 | Symbol:JAZ7 | RefSeq:NP_181007.1 | UniProt:O64687 |
| ProteinID:OAP08791.1 | PFAM:PF06200 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51320 |
| PANTHER:PTHR33077 | PANTHER:PTHR33077:SF17 | SMART:SM00979 | InterPro:Tify_dom | UniParc:UPI000009FD07 | SEG:seg |
Description
TIFY 5BProtein TIFY 5B [Source:UniProtKB/Swiss-Prot;Acc:O64687]
Coordinates
chr2:+:14573030..14573952
Molecular Weight (calculated)
16975.1 Da
IEP (calculated)
7.599
GRAVY (calculated)
-0.594
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIIIKNCDK PLLNFKEMEM QTKCDLELRL LTSSYDSDFH SSLDESSSSE ISQPKQESQI LTIFYNGHMC VSSDLTHLEA NAILSLASRD VEEKSLSLRS
101: SDGSDPPTIP NNSTRFHYQK ASMKRSLHSF LQKRSLRIQA TSPYHRYR
101: SDGSDPPTIP NNSTRFHYQK ASMKRSLHSF LQKRSLRIQA TSPYHRYR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.