Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010794.1-P | Field mustard | nucleus | 67.94 | 68.46 |
| CDX90230 | Canola | nucleus | 67.94 | 68.46 |
| CDY51470 | Canola | nucleus | 66.41 | 66.92 |
| CDX99884 | Canola | nucleus | 65.65 | 65.15 |
| Bra032362.1-P | Field mustard | nucleus | 64.89 | 63.91 |
| CDY26288 | Canola | nucleus | 64.12 | 63.16 |
| VIT_04s0008g00110.t01 | Wine grape | cytosol | 38.17 | 51.02 |
| Solyc08g036620.2.1 | Tomato | nucleus | 39.69 | 50.49 |
| PGSC0003DMT400002991 | Potato | nucleus | 39.69 | 49.06 |
| PGSC0003DMT400022650 | Potato | cytosol | 41.98 | 47.83 |
| Solyc08g036640.2.1 | Tomato | nucleus | 40.46 | 47.32 |
| AT2G34600.1 | Thale cress | nucleus | 53.44 | 47.3 |
| VIT_10s0003g03790.t01 | Wine grape | cytosol | 45.8 | 47.24 |
| VIT_10s0003g03800.t01 | Wine grape | cytosol | 45.04 | 46.46 |
| PGSC0003DMT400002985 | Potato | cytosol | 40.46 | 45.69 |
| VIT_10s0003g03810.t01 | Wine grape | nucleus | 32.82 | 44.79 |
| PGSC0003DMT400022651 | Potato | mitochondrion, nucleus | 40.46 | 42.74 |
| Solyc08g036660.2.1 | Tomato | mitochondrion | 39.69 | 40.94 |
| KRH58647 | Soybean | cytosol | 40.46 | 39.55 |
| KRH11175 | Soybean | cytosol | 38.93 | 38.35 |
| KRH42552 | Soybean | nucleus | 41.98 | 36.67 |
| KRH21078 | Soybean | cytosol | 38.17 | 36.23 |
| GSMUA_Achr2P12970_001 | Banana | cytosol | 34.35 | 33.09 |
| GSMUA_Achr9P10340_001 | Banana | cytosol | 32.06 | 33.07 |
| GSMUA_Achr6P31200_001 | Banana | nucleus | 33.59 | 29.53 |
| GSMUA_Achr7P01220_001 | Banana | extracellular | 26.72 | 29.41 |
| GSMUA_Achr4P31480_001 | Banana | nucleus | 32.82 | 28.48 |
| GSMUA_Achr7P01230_001 | Banana | nucleus | 30.53 | 18.96 |
| GSMUA_Achr3P23250_001 | Banana | cytosol | 25.19 | 18.54 |
Protein Annotations
| MapMan:15.5.45 | EntrezGene:839893 | EMBL:AC074176 | ProteinID:AEE31184.1 | ArrayExpress:AT1G30135 | EnsemblPlantsGene:AT1G30135 |
| RefSeq:AT1G30135 | TAIR:AT1G30135 | RefSeq:AT1G30135-TAIR-G | EnsemblPlants:AT1G30135.1 | TAIR:AT1G30135.1 | EMBL:AY087122 |
| EMBL:BT026098 | InterPro:CCT_CS | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009611 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0031347 |
| GO:GO:1903507 | GO:GO:2000022 | InterPro:IPR010399 | Symbol:JAZ8 | RefSeq:NP_564349.1 | PFAM:PF06200 |
| PFAM:PF09425 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51320 |
| PANTHER:PTHR33077 | PANTHER:PTHR33077:SF17 | UniProt:Q8LBM2 | SMART:SM00979 | InterPro:Tify_dom | UniParc:UPI000009EA4F |
| SEG:seg | : | : | : | : | : |
Description
TIFY5AProtein TIFY 5A [Source:UniProtKB/Swiss-Prot;Acc:Q8LBM2]
Coordinates
chr1:+:10596352..10597341
Molecular Weight (calculated)
14771.3 Da
IEP (calculated)
10.260
GRAVY (calculated)
-0.929
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLQQNCDLE LRLFPTSYDS DSSDTTSVVE STSSGNPQPN EESQRITIFY NGKMCFSSDV THLQARSIIS IASREMKTKS SSNGSDPPNK STSFHHNQLP
101: NPKASMKKSL QSFLQKRKIR IQATSPYHSR R
101: NPKASMKKSL QSFLQKRKIR IQATSPYHSR R
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.