Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05267 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 15.86 | 32.43 |
| GSMUA_Achr3P07370_001 | Banana | plasma membrane | 27.31 | 12.25 |
| Bra039109.1-P | Field mustard | nucleus | 15.42 | 12.24 |
| Zm00001d038128_P004 | Maize | plastid | 26.43 | 11.45 |
| TraesCS1A01G248600.1 | Wheat | plastid | 25.99 | 11.15 |
| Bra022846.1-P | Field mustard | plastid | 27.31 | 11.13 |
| HORVU1Hr1G062340.4 | Barley | plastid | 25.99 | 11.11 |
| TraesCS1B01G259300.2 | Wheat | plastid | 25.99 | 11.11 |
| TraesCS1D01G248100.2 | Wheat | plastid | 25.99 | 11.11 |
| KXG21937 | Sorghum | plastid | 25.99 | 10.97 |
| AT2G31530.1 | Thale cress | plastid | 27.75 | 10.96 |
| Os05t0397700-01 | Rice | plastid | 25.99 | 10.89 |
| VIT_07s0104g00040.t01 | Wine grape | cytosol | 26.87 | 9.95 |
| Solyc09g065120.2.1 | Tomato | cytosol, plastid | 23.35 | 9.2 |
| Bra038815.1-P | Field mustard | plastid | 16.74 | 6.9 |
| KRH38249 | Soybean | cytosol | 3.08 | 6.09 |
Protein Annotations
| EnsemblPlants:Bra029080.1 | EnsemblPlants:Bra029080.1-P | EnsemblPlantsGene:Bra029080 | Gene3D:2.130.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR015943 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat_CS | PANTHER:PTHR22850 | PANTHER:PTHR22850:SF82 |
| ScanProsite:PS00678 | SEG:seg | UniParc:UPI000253FFE7 | UniProt:M4EJW3 | MapMan:35.1 | : |
Description
AT5G58230 (E=2e-025) MSI1, MEE70, ATMSI1 | MSI1 (MULTICOPY SUPRESSOR OF IRA1); protein binding
Coordinates
chrA03:+:6252908..6255231
Molecular Weight (calculated)
25482.0 Da
IEP (calculated)
10.297
GRAVY (calculated)
-0.831
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAQVDVSSV FSVRRRIDTQ HQRGTERKAR QYDDERSEFG GFGCATGKVQ IIQQINQEGE VNRARYIPQN PFVIATKTVN AEVKFKAGHL LSGSDDAQIC
101: LWDINATPKN KVIDAQQIFK PYIPFNINPA GMQPVLTTTY LLAFSSIIAS SDKNRTPTWR GPNRHHLKPK SPSSSQRSST CNQDKTEHKG KEHAGQYGKQ
201: KQQDKPAVKA QAVSVQNRYA ALRDEEA
101: LWDINATPKN KVIDAQQIFK PYIPFNINPA GMQPVLTTTY LLAFSSIIAS SDKNRTPTWR GPNRHHLKPK SPSSSQRSST CNQDKTEHKG KEHAGQYGKQ
201: KQQDKPAVKA QAVSVQNRYA ALRDEEA
001: MNSSQACFFH FSLRPISLSH PSYAFLSKRD PFLCSQPRKC LTTNLNMSRT RQGHSIQMNR RHLLMKERKS FSINYSDKFR DDSMSSEEMH TDALDVEIIP
101: PDSQDIRNSQ NSAVSNTLQD DRPKSFRNRF LDFVRISSVL NTAAERFFKS EIRRRLFVTA VLLVLSRVGY FIPLPGFDRR LIPQDYLSFV SGSVEELGEF
201: GAEIKLSLFQ LGLSPQIIAS IIMQVLCHVL PSLVKLRKEG LDGHEKIKSY IWWLSFFFAI VEALVVAYTS LQYSVFAATA QVKHVMMTSS LLVCGAMTMT
301: WLCDTISESG FGHGSSLIIC VGILTGYTET LHKMLNQISG SFSNWLPYLL GLLGIFTVVT MFAVVVTEGC RKIKLQYYGF KLASASREGS PITEVEPYIP
401: FNINPAGMQP VLTTTYLLAF PSILASILGS PFLLNMKEIL NPESTVGAPP WVYYSIYAFF VFLFNIFDIA NLPKEIADYL NKMGARIPNI KPGKATIEYL
501: TKIQASTRFW GGLLLSFLAT ASTVLDHYLR SINQGFSIGF TSVLIIVGSI IELRRSYHAY NVMPSLSKAL KRYGV
101: PDSQDIRNSQ NSAVSNTLQD DRPKSFRNRF LDFVRISSVL NTAAERFFKS EIRRRLFVTA VLLVLSRVGY FIPLPGFDRR LIPQDYLSFV SGSVEELGEF
201: GAEIKLSLFQ LGLSPQIIAS IIMQVLCHVL PSLVKLRKEG LDGHEKIKSY IWWLSFFFAI VEALVVAYTS LQYSVFAATA QVKHVMMTSS LLVCGAMTMT
301: WLCDTISESG FGHGSSLIIC VGILTGYTET LHKMLNQISG SFSNWLPYLL GLLGIFTVVT MFAVVVTEGC RKIKLQYYGF KLASASREGS PITEVEPYIP
401: FNINPAGMQP VLTTTYLLAF PSILASILGS PFLLNMKEIL NPESTVGAPP WVYYSIYAFF VFLFNIFDIA NLPKEIADYL NKMGARIPNI KPGKATIEYL
501: TKIQASTRFW GGLLLSFLAT ASTVLDHYLR SINQGFSIGF TSVLIIVGSI IELRRSYHAY NVMPSLSKAL KRYGV
Arabidopsis Description
SCY2Preprotein translocase subunit SCY2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IQV7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.