Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48198 | Canola | cytosol | 99.13 | 99.13 |
| Bra023272.1-P | Field mustard | cytosol | 56.52 | 17.47 |
| AT3G49030.1 | Thale cress | cytosol | 66.09 | 17.16 |
| AT2G04230.1 | Thale cress | cytosol | 60.87 | 15.62 |
| Bra025236.1-P | Field mustard | cytosol | 46.09 | 14.4 |
| Bra015355.1-P | Field mustard | cytosol, extracellular, nucleus | 39.13 | 12.93 |
| Bra040480.1-P | Field mustard | cytosol | 59.13 | 12.43 |
| Bra034248.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 42.61 | 11.19 |
| Bra026446.1-P | Field mustard | cytosol | 34.78 | 9.59 |
| Bra026459.1-P | Field mustard | cytosol, nucleus, plastid | 35.65 | 9.38 |
| Bra019111.1-P | Field mustard | cytosol | 30.43 | 9.31 |
| Bra007575.1-P | Field mustard | extracellular, vacuole | 31.3 | 8.16 |
| Bra007397.1-P | Field mustard | cytosol | 26.96 | 7.18 |
| Bra006939.1-P | Field mustard | cytosol | 5.22 | 1.82 |
| Bra019575.1-P | Field mustard | cytosol | 0.0 | 0.0 |
Protein Annotations
Description
AT3G49020 (E=1e-029) | F-box family protein
Coordinates
chrA04:-:11890718..11891140
Molecular Weight (calculated)
13467.4 Da
IEP (calculated)
7.177
GRAVY (calculated)
-0.350
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDSSPKLQI LKLDGSCREY CPVGCEWIQP KCVRECLLLH LETLVWTRYE WEREDVKQVA TYILKNARQL RKATFYPTCV GPKELEKLEM RREMLNELAS
101: VARGSTSCHL VFESE
101: VARGSTSCHL VFESE
001: MLEASPKLQI LKLTDLNMSS TKGNQIGQKW IQPKCVPECL LFHLETFVWT GYEWQRRDEK EVARYILRNT TSLKKATFST KPIEPVKLKV FKKRREILNE
101: LASLGRASNP SDFVFESI
101: LASLGRASNP SDFVFESI
Arabidopsis Description
F-box/FBD/LRR protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNU8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.