Factsheet for Bra037694.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30427	Canola	cytosol	87.7	100.0
Bra037696.1-P	Field mustard	cytosol	80.33	90.74
AT2G43640.1	Thale cress	cytosol	89.34	90.08
Bra000316.1-P	Field mustard	cytosol	80.33	89.91
KRH40004	Soybean	cytosol	78.69	80.0
VIT_05s0094g00400.t01	Wine grape	cytosol	60.66	69.81
PGSC0003DMT400042031	Potato	cytosol	64.75	63.2
GSMUA_Achr11P...	Banana	cytosol	57.38	59.32
KRH23789	Soybean	cytosol	61.48	58.14
TraesCS2B01G490800.1	Wheat	cytosol	60.66	56.92
Os04t0623700-01	Rice	nucleus	61.48	56.82
KRH33974	Soybean	cytosol, endoplasmic reticulum, nucleus	30.33	56.06
TraesCS3D01G128100.1	Wheat	cytosol	31.97	55.71
TraesCS3A01G472700.1	Wheat	cytosol	31.97	55.71
Zm00001d002259_P002	Maize	cytosol	60.66	53.24
TraesCS2D01G467800.1	Wheat	cytosol	60.66	52.86
TraesCS3A01G092500.1	Wheat	cytosol, plastid	30.33	52.86
TraesCS1A01G132700.1	Wheat	cytosol, plastid	30.33	52.86
TraesCS7A01G549600.1	Wheat	cytosol, plastid	30.33	52.86
TraesCS7B01G031200.1	Wheat	cytosol	30.33	52.86
TraesCS7D01G219900.1	Wheat	cytosol	30.33	52.86
TraesCS1A01G083600.1	Wheat	cytosol	28.69	52.24
TraesCS2A01G467800.1	Wheat	nucleus	59.84	52.14
TraesCS1A01G199800.1	Wheat	cytosol, plastid	29.51	51.43
TraesCS3A01G307400.1	Wheat	cytosol	29.51	51.43
TraesCS4A01G371300.1	Wheat	cytosol	29.51	51.43
Bra004775.1-P	Field mustard	cytosol	95.08	38.28
OQU82368	Sorghum	plastid	61.48	37.5
TraesCS3A01G166400.2	Wheat	cytosol	36.07	21.26

Protein Annotations

MapMan:23.3.1.1.4	Gene3D:3.30.720.10	EnsemblPlantsGene:Bra037694	EnsemblPlants:Bra037694.1	EnsemblPlants:Bra037694.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005786	GO:GO:0006614	GO:GO:0006810	GO:GO:0008150	GO:GO:0008312
GO:GO:0030942	GO:GO:0048500	InterPro:IPR009018	UniProt:M4F9D1	PFAM:PD009170	PFAM:PF02290
PANTHER:PTHR12013	SUPFAM:SSF54762	InterPro:Signal_recog_particle_SRP14	InterPro:Signal_recog_particle_SRP9/14	UniParc:UPI0002543E6D	SEG:seg

Description

AT2G43640 (E=2e-039) | signal recognition particle 14 kDa family protein / SRP14 family protein

Coordinates

chrA04:-:18162978..18164297

Molecular Weight (calculated)

13872.0 Da

IEP (calculated)

10.962

GRAVY (calculated)

-0.766

Length

122 amino acids

Sequence
(BLAST)

001: MVLLQLDPFL NELTSMFEKS KEKGSVWVTL KRSSLKSKLQ KRKLSAAGES IEYRCLIRAT DAKKTISTSV GAKDHLRFQA SYATILKAHM TALKKRERKD
101: RKKPTEAEKK ESTSTSTKPK KL

Best Arabidopsis Sequence Match ( AT2G43640.2 )
(BLAST)

001: MVLLQLDPFL NELTSMFEKS KEKGSVWVTL KRSSLKSKVQ KRKLSSVGES IEYRCLIRAT DGKKTVSTSV GAKDHQRFQA SYATILKAHM TALKKRERKD
101: RKKSTEAEKK ESTSTTKSKK L

Arabidopsis Description

SRP14Signal recognition particle 14 kDa protein [Source:UniProtKB/Swiss-Prot;Acc:O04421]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.