Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037694.1-P | Field mustard | cytosol | 90.08 | 89.34 |
| Bra000316.1-P | Field mustard | cytosol | 80.17 | 88.99 |
| CDX83471 | Canola | cytosol | 79.34 | 88.07 |
| Bra037696.1-P | Field mustard | cytosol | 78.51 | 87.96 |
| CDY30425 | Canola | cytosol | 78.51 | 87.96 |
| CDY30427 | Canola | cytosol | 77.69 | 87.85 |
| CDY44245 | Canola | cytosol | 78.51 | 87.16 |
| CDY23384 | Canola | cytosol | 75.21 | 84.26 |
| KRH40004 | Soybean | cytosol | 78.51 | 79.17 |
| VIT_05s0094g00400.t01 | Wine grape | cytosol | 61.16 | 69.81 |
| PGSC0003DMT400042031 | Potato | cytosol | 66.94 | 64.8 |
| CDY69452 | Canola | cytosol | 90.91 | 61.45 |
| GSMUA_Achr11P... | Banana | cytosol | 59.5 | 61.02 |
| TraesCS2B01G490800.1 | Wheat | cytosol | 62.81 | 58.46 |
| KRH23789 | Soybean | cytosol | 61.98 | 58.14 |
| TraesCS3D01G128100.1 | Wheat | cytosol | 33.06 | 57.14 |
| TraesCS3A01G472700.1 | Wheat | cytosol | 33.06 | 57.14 |
| Os04t0623700-01 | Rice | nucleus | 61.98 | 56.82 |
| Zm00001d002259_P002 | Maize | cytosol | 62.81 | 54.68 |
| TraesCS1A01G132700.1 | Wheat | cytosol, plastid | 31.41 | 54.29 |
| TraesCS2D01G467800.1 | Wheat | cytosol | 62.81 | 54.29 |
| TraesCS3A01G092500.1 | Wheat | cytosol, plastid | 31.41 | 54.29 |
| TraesCS7A01G549600.1 | Wheat | cytosol, plastid | 31.41 | 54.29 |
| TraesCS7D01G219900.1 | Wheat | cytosol | 31.41 | 54.29 |
| TraesCS1A01G083600.1 | Wheat | cytosol | 29.75 | 53.73 |
| TraesCS2A01G467800.1 | Wheat | nucleus | 61.98 | 53.57 |
| KRH33974 | Soybean | cytosol, endoplasmic reticulum, nucleus | 28.93 | 53.03 |
| TraesCS1A01G199800.1 | Wheat | cytosol, plastid | 30.58 | 52.86 |
| TraesCS3A01G307400.1 | Wheat | cytosol | 30.58 | 52.86 |
| TraesCS4A01G371300.1 | Wheat | cytosol | 30.58 | 52.86 |
| TraesCS7B01G031200.1 | Wheat | cytosol | 30.58 | 52.86 |
| OQU82368 | Sorghum | plastid | 61.98 | 37.5 |
| CDX79810 | Canola | cytosol | 90.91 | 36.3 |
| Bra004775.1-P | Field mustard | cytosol | 90.91 | 36.3 |
| TraesCS3A01G166400.2 | Wheat | cytosol | 35.54 | 20.77 |
Protein Annotations
| MapMan:23.3.1.1.4 | Gene3D:3.30.720.10 | EntrezGene:818966 | UniProt:A0A178VRJ8 | ProteinID:AAB64042.1 | ProteinID:AEC10298.1 |
| ProteinID:AEC10299.1 | ProteinID:AEC10300.1 | EMBL:AK227403 | EMBL:AK317327 | ArrayExpress:AT2G43640 | EnsemblPlantsGene:AT2G43640 |
| RefSeq:AT2G43640 | TAIR:AT2G43640 | RefSeq:AT2G43640-TAIR-G | EnsemblPlants:AT2G43640.1 | TAIR:AT2G43640.1 | EMBL:AY088850 |
| Unigene:At.46807 | UniProt:B9DGY4 | EMBL:BT003088 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005786 |
| GO:GO:0006614 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008312 | GO:GO:0030529 | GO:GO:0030942 |
| GO:GO:0045047 | GO:GO:0048500 | InterPro:IPR009018 | RefSeq:NP_001078050.1 | RefSeq:NP_001189744.1 | RefSeq:NP_181892.1 |
| UniProt:O04421 | ProteinID:OAP07683.1 | PFAM:PD009170 | PFAM:PF02290 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR12013 | SUPFAM:SSF54762 | InterPro:Signal_recog_particle_SRP14 | InterPro:Signal_recog_particle_SRP9/14 |
| UniParc:UPI000000145E | EMBL:Y10116 | SEG:seg | : | : | : |
Description
SRP14Signal recognition particle 14 kDa protein [Source:UniProtKB/Swiss-Prot;Acc:O04421]
Coordinates
chr2:-:18097406..18099130
Molecular Weight (calculated)
13781.8 Da
IEP (calculated)
10.962
GRAVY (calculated)
-0.832
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLLQLDPFL NELTSMFEKS KEKGSVWVTL KRSSLKSKVQ KRKLSSVGES IEYRCLIRAT DGKKTVSTSV GAKDHQRFQA SYATILKAHM TALKKRERKD
101: RKKSTEAEKK ESTSTTKSKK L
101: RKKSTEAEKK ESTSTTKSKK L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.