Factsheet for TraesCS3A01G166400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G549600.1	Wheat	cytosol, plastid	31.4	92.86
TraesCS1A01G083600.1	Wheat	cytosol	29.95	92.54
TraesCS1A01G132700.1	Wheat	cytosol, plastid	30.92	91.43
TraesCS3A01G307400.1	Wheat	cytosol	30.92	91.43
TraesCS3A01G092500.1	Wheat	cytosol, plastid	30.92	91.43
TraesCS3D01G128100.1	Wheat	cytosol	30.43	90.0
TraesCS1A01G199800.1	Wheat	cytosol, plastid	30.43	90.0
TraesCS3A01G472700.1	Wheat	cytosol	28.99	85.71
TraesCS4A01G371300.1	Wheat	cytosol	28.5	84.29
TraesCS2A01G467800.1	Wheat	nucleus	29.95	44.29
Os04t0623700-01	Rice	nucleus	26.09	40.91
Bra037694.1-P	Field mustard	cytosol	21.26	36.07
KRH40004	Soybean	cytosol	20.77	35.83
GSMUA_Achr11P...	Banana	cytosol	20.29	35.59
AT2G43640.1	Thale cress	cytosol	20.77	35.54
PGSC0003DMT400042031	Potato	cytosol	20.29	33.6
Zm00001d002259_P002	Maize	cytosol	22.22	33.09
CDY30427	Canola	cytosol	16.91	32.71
CDY44245	Canola	cytosol	16.91	32.11
Bra000316.1-P	Field mustard	cytosol	16.91	32.11
CDY30425	Canola	cytosol	16.43	31.48
Bra037696.1-P	Field mustard	cytosol	16.43	31.48
CDX83471	Canola	cytosol	16.43	31.19
CDY23384	Canola	cytosol	15.46	29.63
VIT_05s0094g00400.t01	Wine grape	cytosol	14.98	29.25
CDY69452	Canola	cytosol	23.67	27.37
KRH23789	Soybean	cytosol	15.46	24.81
OQU82368	Sorghum	plastid	22.71	23.5
CDX79810	Canola	cytosol	22.71	15.51
Bra004775.1-P	Field mustard	cytosol	22.71	15.51
KRH33974	Soybean	cytosol, endoplasmic reticulum, nucleus	2.42	7.58

Protein Annotations

MapMan:23.3.1.1.4	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005786	GO:GO:0006614	GO:GO:0006810
GO:GO:0008150	GO:GO:0008312	GO:GO:0030942	GO:GO:0048500	InterPro:IPR009018	PFAM:PD009170
PFAM:PF02290	PANTHER:PTHR12013	SUPFAM:SSF54762	InterPro:Signal_recog_particle_SRP14	InterPro:Signal_recog_particle_SRP9/14	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3A01G166400	EnsemblPlants:TraesCS3A01G166400.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:+:171150704..171151604

Molecular Weight (calculated)

23301.1 Da

IEP (calculated)

8.574

GRAVY (calculated)

0.220

Length

207 amino acids

Sequence
(BLAST)

001: MIRTENSENF KDKINVVTSV MAAVYGGDPS RRTPQAICIC PTREIAQQVL MQADMFLTKL TSMCKRSTEK GSMWVTMKRC ERPPTLTAGL CGVGCRFDGF
101: NNSDVMSCSM CAVSMKCQAR LKKMTSKGEP VEYRCLVCAT DGKRNISTSV LFTFSLLLVR HYVCWMCFAL ILCLMVIRLP LFSPLVCYDL NYRSNICIFP
201: SCICCMN

Best Arabidopsis Sequence Match ( AT2G43640.1 )
(BLAST)

001: MVLLQLDPFL NELTSMFEKS KEKGSVWVTL KRSSLKSKVQ KRKLSSVGES IEYRCLIRAT DGKKTVSTSV GAKDHQRFQA SYATILKAHM TALKKRERKD
101: RKKSTEAEKK ESTSTTKSKK L

Arabidopsis Description

SRP14Signal recognition particle 14 kDa protein [Source:UniProtKB/Swiss-Prot;Acc:O04421]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.