CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002259_P002	Maize	cytosol	56.5	81.3
Os04t0623700-01	Rice	nucleus	51.0	77.27
TraesCS2B01G490800.1	Wheat	cytosol	45.0	69.23
TraesCS2A01G467800.1	Wheat	nucleus	45.0	64.29
TraesCS3A01G472700.1	Wheat	cytosol	22.5	64.29
TraesCS2D01G467800.1	Wheat	cytosol	44.5	63.57
TraesCS4A01G371300.1	Wheat	cytosol	22.0	62.86
TraesCS3D01G128100.1	Wheat	cytosol	22.0	62.86
AT2G43640.1	Thale cress	cytosol	37.5	61.98
KRH40004	Soybean	cytosol	37.0	61.67
Bra037694.1-P	Field mustard	cytosol	37.5	61.48
TraesCS7B01G031200.1	Wheat	cytosol	21.5	61.43
TraesCS3A01G092500.1	Wheat	cytosol, plastid	21.5	61.43
TraesCS7A01G549600.1	Wheat	cytosol, plastid	21.5	61.43
TraesCS1A01G083600.1	Wheat	cytosol	20.5	61.19
CDY30427	Canola	cytosol	32.5	60.75
GSMUA_Achr11P...	Banana	cytosol	35.5	60.17
TraesCS3A01G307400.1	Wheat	cytosol	21.0	60.0
TraesCS1A01G132700.1	Wheat	cytosol, plastid	21.0	60.0
TraesCS1A01G199800.1	Wheat	cytosol, plastid	21.0	60.0
TraesCS7D01G219900.1	Wheat	cytosol	21.0	60.0
Bra037696.1-P	Field mustard	cytosol	31.5	58.33
CDY30425	Canola	cytosol	31.5	58.33
PGSC0003DMT400042031	Potato	cytosol	36.0	57.6
VIT_05s0094g00400.t01	Wine grape	cytosol	30.5	57.55
CDY44245	Canola	cytosol	31.0	56.88
Bra000316.1-P	Field mustard	cytosol	31.0	56.88
CDX83471	Canola	cytosol	30.5	55.96
CDY23384	Canola	cytosol	30.0	55.56
KRH23789	Soybean	cytosol	28.5	44.19
CDY69452	Canola	cytosol	39.5	44.13
KRH33974	Soybean	cytosol, endoplasmic reticulum, nucleus	14.0	42.42
CDX79810	Canola	cytosol	39.5	26.07
Bra004775.1-P	Field mustard	cytosol	39.5	26.07
TraesCS3A01G166400.2	Wheat	cytosol	23.5	22.71

Protein Annotations

MapMan:23.3.1.1.4	Gene3D:3.30.720.10	UniProt:A0A1Z5RF49	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005786
GO:GO:0006614	GO:GO:0006810	GO:GO:0008150	GO:GO:0008312	GO:GO:0030942	GO:GO:0048500
InterPro:IPR009018	EnsemblPlants:OQU82368	ProteinID:OQU82368	ProteinID:OQU82368.1	PFAM:PD009170	PFAM:PF02290
PANTHER:PTHR12013	EnsemblPlantsGene:SORBI_3006G220700	SUPFAM:SSF54762	InterPro:Signal_recog_particle_SRP14	InterPro:Signal_recog_particle_SRP9/14	UniParc:UPI000B426175
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:56751169..56754710

Molecular Weight (calculated)

22467.5 Da

IEP (calculated)

11.569

GRAVY (calculated)

-0.771

Length

200 amino acids

Sequence
(BLAST)

001: MNGPIFLGPF VSAGLGRTAL RLGYIRSPGV LRSSPLSARR LPRYSRRRRR RPTAQIFVGL FSGNEHPKMV VLQPDRFLSD LTSMYERSTE KGSVWVTMKR
101: STLKSKAQLQ KMEKKGQEVE HRCLVRASDG KKSISTSVSL KEYAKFQASY ATVLKAHMHA LKKRERKDKK KAADAEKAVE TAPKKQQKKA SSKKSSGSKS

Best Arabidopsis Sequence Match ( AT2G43640.2 )
(BLAST)

001: MVLLQLDPFL NELTSMFEKS KEKGSVWVTL KRSSLKSKVQ KRKLSSVGES IEYRCLIRAT DGKKTVSTSV GAKDHQRFQA SYATILKAHM TALKKRERKD
101: RKKSTEAEKK ESTSTTKSKK L

Arabidopsis Description

SRP14Signal recognition particle 14 kDa protein [Source:UniProtKB/Swiss-Prot;Acc:O04421]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.