Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93603 | Canola | nucleus | 84.62 | 87.01 |
| CDY06291 | Canola | nucleus | 71.98 | 72.38 |
| CDY22709 | Canola | nucleus | 70.33 | 70.33 |
| AT1G07980.1 | Thale cress | nucleus, plastid | 65.93 | 58.25 |
| GSMUA_Achr11P... | Banana | mitochondrion | 24.73 | 42.45 |
| KRH24892 | Soybean | cytosol | 17.58 | 40.0 |
| KRH24891 | Soybean | nucleus | 30.77 | 26.29 |
| KRH29946 | Soybean | nucleus | 30.22 | 23.5 |
| Os03t0852300-01 | Rice | plastid | 31.32 | 18.81 |
| TraesCS5B01G538900.1 | Wheat | nucleus | 30.22 | 13.41 |
| HORVU5Hr1G123050.4 | Barley | nucleus | 30.22 | 12.94 |
| VIT_06s0004g03030.t01 | Wine grape | nucleus | 30.22 | 12.94 |
| Solyc06g016750.2.1 | Tomato | nucleus | 30.77 | 12.56 |
| Zm00001d034872_P001 | Maize | nucleus | 24.73 | 12.26 |
| KXG37104 | Sorghum | nucleus, plastid | 26.92 | 11.29 |
| TraesCS5D01G557100.1 | Wheat | nucleus | 30.77 | 11.16 |
| TraesCS4A01G326000.1 | Wheat | nucleus | 29.67 | 11.02 |
| PGSC0003DMT400077500 | Potato | nucleus | 21.98 | 8.6 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.50 | GO:A0A078E130 | UniProt:A0A078E130 | ProteinID:AHJ80500.1 | InterPro:CBFA_NFYB_domain |
| EnsemblPlants:CDX95106 | ProteinID:CDX95106 | ProteinID:CDX95106.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | EnsemblPlantsGene:GSBRNA2T00100642001 |
| InterPro:Histone-fold | InterPro:IPR009072 | PFAM:PF00808 | PANTHER:PTHR10252 | PANTHER:PTHR10252:SF54 | SUPFAM:SSF47113 |
| UniParc:UPI0004EE960A | SEG:seg | : | : | : | : |
Description
BnaC05g05650DBnaC05g05650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078E130]
Coordinates
chrLK031886:+:1195067..1196524
Molecular Weight (calculated)
20607.2 Da
IEP (calculated)
9.627
GRAVY (calculated)
-0.925
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSKKRKSD GVNKGDGLNA RSSGSKSKKN SSNKANLKDA AKKDAEVHEI SESSSSEGRR DEPKESNGGV VVSEDAKMIR FPMNRIRRIM RSDNSAPQII
101: MQDAVFLVNK ATELFIERFS EEAYGSSVKD KKKFIHYKHL SSVVSNEERY EFLADCVPEK LKAEVALEEW ERSMTDRWKE PT
101: MQDAVFLVNK ATELFIERFS EEAYGSSVKD KKKFIHYKHL SSVVSNEERY EFLADCVPEK LKAEVALEEW ERSMTDRWKE PT
001: MVSSKKPKEK KARSDVVVNK ASGRSKRSSG SRTKKTSNKV NIVKKKPEIY EISESSSSDS VEEAIRGDEA KKSNGVVSKR GNGKSVGIPT KTSKNREEDD
101: GGAEDAKIKF PMNRIRRIMR SDNSAPQIMQ DAVFLVNKAT EMFIERFSEE AYDSSVKDKK KFIHYKHLSS VVSNDQRYEF LADSVPEKLK AEAALEEWER
201: GMTDAG
101: GGAEDAKIKF PMNRIRRIMR SDNSAPQIMQ DAVFLVNKAT EMFIERFSEE AYDSSVKDKK KFIHYKHLSS VVSNDQRYEF LADSVPEKLK AEAALEEWER
201: GMTDAG
Arabidopsis Description
NF-YC10At1g07980 [Source:UniProtKB/TrEMBL;Acc:Q9LN09]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.