Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06291 | Canola | nucleus | 63.59 | 72.38 |
| Bra031606.1-P | Field mustard | nucleus, plastid | 63.59 | 71.98 |
| CDY22709 | Canola | nucleus | 62.14 | 70.33 |
| CDX93603 | Canola | nucleus | 58.25 | 67.8 |
| Bra018668.1-P | Field mustard | nucleus | 57.77 | 67.23 |
| CDX95106 | Canola | nucleus | 58.25 | 65.93 |
| GSMUA_Achr11P... | Banana | mitochondrion | 21.36 | 41.51 |
| KRH24892 | Soybean | cytosol | 15.53 | 40.0 |
| KRH29946 | Soybean | nucleus | 29.61 | 26.07 |
| KRH24891 | Soybean | nucleus | 26.21 | 25.35 |
| Os03t0852300-01 | Rice | plastid | 29.13 | 19.8 |
| Solyc06g016750.2.1 | Tomato | nucleus | 30.58 | 14.13 |
| VIT_06s0004g03030.t01 | Wine grape | nucleus | 29.13 | 14.12 |
| Zm00001d034872_P001 | Maize | nucleus | 24.76 | 13.9 |
| TraesCS5B01G538900.1 | Wheat | nucleus | 27.18 | 13.66 |
| HORVU5Hr1G123050.4 | Barley | nucleus | 26.7 | 12.94 |
| KXG37104 | Sorghum | nucleus, plastid | 26.21 | 12.44 |
| TraesCS5D01G557100.1 | Wheat | nucleus | 26.21 | 10.76 |
| PGSC0003DMT400077500 | Potato | nucleus | 23.79 | 10.54 |
| TraesCS4A01G326000.1 | Wheat | nucleus | 24.76 | 10.41 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.50 | EntrezGene:837313 | UniProt:A0A178WGX8 | ProteinID:AAF79844.1 | ProteinID:AEE28222.1 |
| ArrayExpress:AT1G07980 | EnsemblPlantsGene:AT1G07980 | RefSeq:AT1G07980 | TAIR:AT1G07980 | RefSeq:AT1G07980-TAIR-G | EnsemblPlants:AT1G07980.1 |
| TAIR:AT1G07980.1 | EMBL:AY086815 | EMBL:BT025266 | InterPro:CBFA_NFYB_domain | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | Symbol:NF-YC10 | RefSeq:NP_563803.1 | ProteinID:OAP16723.1 |
| PFAM:PF00808 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR10252 | PANTHER:PTHR10252:SF54 | UniProt:Q9LN09 | SUPFAM:SSF47113 | UniParc:UPI00000A7D98 | SEG:seg |
Description
NF-YC10At1g07980 [Source:UniProtKB/TrEMBL;Acc:Q9LN09]
Coordinates
chr1:-:2473165..2475128
Molecular Weight (calculated)
23028.1 Da
IEP (calculated)
10.266
GRAVY (calculated)
-0.967
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSKKPKEK KARSDVVVNK ASGRSKRSSG SRTKKTSNKV NIVKKKPEIY EISESSSSDS VEEAIRGDEA KKSNGVVSKR GNGKSVGIPT KTSKNREEDD
101: GGAEDAKIKF PMNRIRRIMR SDNSAPQIMQ DAVFLVNKAT EMFIERFSEE AYDSSVKDKK KFIHYKHLSS VVSNDQRYEF LADSVPEKLK AEAALEEWER
201: GMTDAG
101: GGAEDAKIKF PMNRIRRIMR SDNSAPQIMQ DAVFLVNKAT EMFIERFSEE AYDSSVKDKK KFIHYKHLSS VVSNDQRYEF LADSVPEKLK AEAALEEWER
201: GMTDAG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.