Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79270 | Canola | cytosol | 47.48 | 51.16 |
| AT1G26670.1 | Thale cress | cytosol, golgi, nucleus | 64.03 | 40.09 |
| CDY28553 | Canola | cytosol | 58.27 | 36.49 |
| CDY44068 | Canola | cytosol | 58.27 | 36.49 |
| VIT_01s0113g00540.t01 | Wine grape | cytosol | 49.64 | 31.36 |
| Solyc05g013050.2.1 | Tomato | cytosol | 48.92 | 30.77 |
| KRH74936 | Soybean | endoplasmic reticulum | 48.2 | 30.18 |
| PGSC0003DMT400072860 | Potato | cytosol | 47.48 | 29.86 |
| KRH70794 | Soybean | endoplasmic reticulum | 46.04 | 28.83 |
| CDX74451 | Canola | cytosol, golgi, nucleus | 38.85 | 24.43 |
| CDY00099 | Canola | cytosol | 38.85 | 24.43 |
| CDY19995 | Canola | cytosol | 38.85 | 24.43 |
| CDY30250 | Canola | cytosol, golgi, nucleus | 38.85 | 24.43 |
| CDY37005 | Canola | cytosol, golgi, nucleus | 38.13 | 23.98 |
| CDX74445 | Canola | cytosol, golgi, mitochondrion, nucleus, plastid | 3.6 | 5.43 |
| CDX95233 | Canola | mitochondrion | 3.6 | 5.43 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.400 | MapMan:22.7.2.1 | GO:A0A078HUF3 | UniProt:A0A078HUF3 | EnsemblPlants:CDY42125 |
| ProteinID:CDY42125 | ProteinID:CDY42125.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 |
| GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016192 | EnsemblPlantsGene:GSBRNA2T00074303001 | InterPro:IPR038407 |
| PFAM:PF05008 | PANTHER:PTHR21230 | PANTHER:PTHR21230:SF52 | InterPro:SNARE | SUPFAM:SSF47661 | UniParc:UPI0004EE2F0F |
| InterPro:Vesicle_trsprt_v-SNARE_N | SEG:seg | InterPro:v-SNARE_N_sf | : | : | : |
Description
BnaC05g40940DBnaC05g40940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUF3]
Coordinates
chrLK032516:+:8927..10630
Molecular Weight (calculated)
16017.4 Da
IEP (calculated)
10.393
GRAVY (calculated)
-0.678
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRFSPTEKR RRISLLRLSL AWKKMMLEAI SLQQSANLVC LSKLREYKSD LNQLKKDFKR VSSPDANQST REDLMEPGMA DVHAVSGDHG ERFAMSMEML
101: DQSSNIIRES RRLMLETEVG ISVVENLSQQ RPNPPSRSH
101: DQSSNIIRES RRLMLETEVG ISVVENLSQQ RPNPPSRSH
001: MSDVFEGYER QYCELSTNLS RKCHSASVLS NGEEKKGKIA EIKSGIDEAD VLIRKMDLEA RSLQPSAKAV CLSKLREYKS DLNQLKKEFK RVSSADAKPS
101: SREELMESGM ADLHAVSADQ RGRLAMSVER LDQSSDRIRE SRRLMLETEE VGISIVQDLS QQRQTLLHAH NKLHGVDDAI DKSKKVLTAM SRRMTRNKWI
201: ITSVIVALVL AIILIISYKL SH
101: SREELMESGM ADLHAVSADQ RGRLAMSVER LDQSSDRIRE SRRLMLETEE VGISIVQDLS QQRQTLLHAH NKLHGVDDAI DKSKKVLTAM SRRMTRNKWI
201: ITSVIVALVL AIILIISYKL SH
Arabidopsis Description
VTI12VTI1B [Source:UniProtKB/TrEMBL;Acc:A0A178W140]
SUBAcon: [golgi,nucleus,cytosol]
SUBAcon: [golgi,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.