CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013730_P001	Maize	mitochondrion	92.92	93.31
TraesCS4B01G080000.1	Wheat	mitochondrion	83.75	84.81
TraesCS4D01G078900.1	Wheat	mitochondrion	83.33	84.39
TraesCS4A01G235000.1	Wheat	mitochondrion	83.33	84.39
HORVU4Hr1G013640.1	Barley	mitochondrion	82.92	83.97
Os03t0612600-01	Rice	mitochondrion, nucleus	56.67	77.71
VIT_07s0197g00010.t01	Wine grape	mitochondrion, plastid	50.0	48.19
VIT_00s1247g00020.t01	Wine grape	mitochondrion	49.58	48.18
CDY12782	Canola	mitochondrion	49.58	47.98
CDY01458	Canola	mitochondrion	49.58	47.79
Bra012111.1-P	Field mustard	mitochondrion	48.75	46.99
CDY71642	Canola	mitochondrion	38.75	46.27
AT5G66860.1	Thale cress	mitochondrion	47.92	46.18
KRH57744	Soybean	mitochondrion	47.08	45.94
KRH04667	Soybean	mitochondrion	35.42	45.7
Bra037144.1-P	Field mustard	cytosol	37.92	45.5
Solyc02g090420.2.1	Tomato	endoplasmic reticulum	45.0	44.63
PGSC0003DMT400026094	Potato	mitochondrion, plastid	44.58	42.97
CDX81361	Canola	mitochondrion	28.75	40.12
EES03203	Sorghum	mitochondrion	36.25	32.95

Protein Annotations

Gene3D:2.170.120.20	MapMan:35.2	EntrezGene:8062511	UniProt:C5WSB5	EnsemblPlants:EER91230	ProteinID:EER91230
ProteinID:EER91230.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003729	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008097	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	InterPro:IPR037121
PFAM:PF01386	PFAM:PF14693	PANTHER:PTHR33284	PANTHER:PTHR33284:SF2	InterPro:Ribosomal_L25	InterPro:Ribosomal_L25/Gln-tRNA_synth
InterPro:Ribosomal_L25_C	InterPro:Ribosomal_L25_b-dom	EnsemblPlantsGene:SORBI_3001G167500	SUPFAM:SSF50715	unigene:Sbi.20585	UniParc:UPI0001A821AB
RefSeq:XP_002464232.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:13943356..13948614

Molecular Weight (calculated)

26080.9 Da

IEP (calculated)

10.391

GRAVY (calculated)

-0.161

Length

240 amino acids

Sequence
(BLAST)

001: MAQFLRGKAT AAAAATAARE AAPWRRTASA SYHHTIQAVP RETAGPRAAA RERRHGRVPA VLLTLAGAAP GNGIAHRQLL TADRRQLAEM LKQSPYFLST
101: PVRLQVRAGE RSNAIVHAGT VLPIKVHRDE TSGNILNLVM VKADEGTMLK VDLPVEFKGE DTCPGLKKGG FLQKIRTSLV YLCPAEHIPP KIEVDLTNLD
201: VGDRVLMHDI PVHPSLKLLS KNETMPICKI LASKPIEPVE

Best Arabidopsis Sequence Match ( AT5G66860.1 )
(BLAST)

001: MAKWWRGLRS VTAEVADLPA SSFGRSIRCI HQYQTIQAIP REATGRGVSA RDRTIGRIPA VVFPQSLLDT DASKRGVSRK QLLTADKKQI KSIIDSVGLP
101: FFCSTTFQLQ IRAGQGSSTL VESGRVLPLK VHRDEETGKI LNLVFVWADD GEKLKVDVPV VFKGLDHCPG LQKGGNLRTI RSTLKLLGPA EHIPSKIEVD
201: VSNLDIEDKV LLQDVVFHPS LKLLSKNETM PVCKIVATSP VKEPEAVQA

Arabidopsis Description

Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FKZ4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.