CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011263_P001	Maize	mitochondrion	87.88	89.92
Os05t0270000-01	Rice	mitochondrion	89.77	89.43
TraesCS3D01G215300.1	Wheat	mitochondrion	87.12	86.79
TraesCS3B01G243200.1	Wheat	mitochondrion	87.12	86.79
TraesCS3A01G212900.1	Wheat	mitochondrion	86.74	85.77
Os01t0593500-00	Rice	mitochondrion	86.74	84.5
HORVU3Hr1G051530.1	Barley	plastid	86.36	75.75
GSMUA_Achr2P08360_001	Banana	mitochondrion	68.94	69.47
KRG94894	Soybean	mitochondrion	62.5	64.2
VIT_02s0025g00620.t01	Wine grape	mitochondrion	62.12	63.57
PGSC0003DMT400002340	Potato	mitochondrion	60.23	63.35
VIT_04s0023g00850.t01	Wine grape	mitochondrion	61.36	62.79
PGSC0003DMT400040794	Potato	mitochondrion	54.92	62.77
Solyc11g018560.1.1	Tomato	mitochondrion	59.47	62.3
CDY41665	Canola	mitochondrion	62.5	60.89
Bra010538.1-P	Field mustard	mitochondrion	61.36	59.78
CDY24807	Canola	mitochondrion	60.98	59.41
CDX98162	Canola	cytosol	30.68	58.7
Bra013716.1-P	Field mustard	mitochondrion	59.09	58.21
CDY44122	Canola	mitochondrion	59.09	58.21
CDY57655	Canola	mitochondrion	59.09	58.21
AT4G23620.2	Thale cress	mitochondrion	60.23	57.4
KRH06647	Soybean	nucleus	44.7	48.96
CDY41659	Canola	plastid	17.05	40.91
EER91230	Sorghum	mitochondrion	32.95	36.25
CDY10889	Canola	cytosol	19.7	29.55

Protein Annotations

Gene3D:2.170.120.20	Gene3D:2.40.240.10	MapMan:35.2	EntrezGene:8082181	UniProt:C5XPK7	EnsemblPlants:EES03203
ProteinID:EES03203	ProteinID:EES03203.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008097	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	GO:GO:0050897
InterPro:IPR020056	InterPro:IPR037121	PFAM:PD012503	PFAM:PF01386	PFAM:PF14693	PANTHER:PTHR33284
InterPro:Rbsml_L25/Gln-tRNA_synth_N	InterPro:Ribosomal_L25	InterPro:Ribosomal_L25/Gln-tRNA_synth	InterPro:Ribosomal_L25_C	InterPro:Ribosomal_L25_b-dom	EnsemblPlantsGene:SORBI_3003G205400
SUPFAM:SSF50715	unigene:Sbi.8076	UniParc:UPI0001A84EAB	RefSeq:XP_002458083.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:53562233..53564791

Molecular Weight (calculated)

29311.9 Da

IEP (calculated)

10.373

GRAVY (calculated)

-0.245

Length

264 amino acids

Sequence
(BLAST)

001: MLLRRPLQTL TLPLLRRHFA AAAAAEALVS PHQAVDPLSP PYDYLPGHPR PDAKHDEVIL AVPRASSGRH VAAKERKAGR VPAVVFEQEN GQEGGNKRLV
101: SVQSKQIRKL VDHLGRSFFL SRLFRLQVWS EHAGQGELIE SVRVLPRKVH LHAGTDEPLN ITFMRAPSSA LLKIDVPLMF IGEDASPGLR KGAYFNTIKR
201: TVKYLCPADI VPPYIEVDLS ELDVGQKLLM RDLKVHPALK LLQSPDQPIC NIIGSRAPEQ KKGK

Best Arabidopsis Sequence Match ( AT4G23620.1 )
(BLAST)

001: MLLRRAKTLP KTLQNLRLFS PAANAALSLD HIQETQLTYL PGFPRPDPKH AETILAVPRS VSGKSISAKE RKAGRVPSII FEQEDGQHGG NKRLISVQTN
101: QIRKLVNHLG YSFFLSRLFD VEVRAEIGSD EVIEKVRALP RAIHLHSGTD APLNVTFIRA PPGALLKVDI PLVFIGDDVS PGLKKGASLN TIKRTVKFLC
201: PAEIIPPYIE VDLSQLDIGQ KLVMGDLKVH PALKLIKSKD EPIVKVAGGR VTDTQKKSSD TQKK

Arabidopsis Description

Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JPA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.