Factsheet for TraesCS3A01G212900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G215300.1	Wheat	mitochondrion	98.13	98.87
TraesCS3B01G243200.1	Wheat	mitochondrion	97.38	98.11
HORVU3Hr1G051530.1	Barley	plastid	98.13	87.04
EES03203	Sorghum	mitochondrion	85.77	86.74
Os05t0270000-01	Rice	mitochondrion	84.27	84.91
Zm00001d011263_P001	Maize	mitochondrion	81.27	84.11
Os01t0593500-00	Rice	mitochondrion	83.52	82.29
GSMUA_Achr2P08360_001	Banana	mitochondrion	66.67	67.94
VIT_02s0025g00620.t01	Wine grape	mitochondrion	62.92	65.12
VIT_04s0023g00850.t01	Wine grape	mitochondrion	62.55	64.73
KRG94894	Soybean	mitochondrion	62.17	64.59
PGSC0003DMT400040794	Potato	mitochondrion	55.81	64.5
PGSC0003DMT400002340	Potato	mitochondrion	60.3	64.14
Solyc11g018560.1.1	Tomato	mitochondrion	59.93	63.49
CDY41665	Canola	mitochondrion	61.8	60.89
Bra010538.1-P	Field mustard	mitochondrion	61.05	60.15
CDX98162	Canola	cytosol	31.09	60.14
CDY24807	Canola	mitochondrion	60.67	59.78
CDY57655	Canola	mitochondrion	58.05	57.84
CDY44122	Canola	mitochondrion	58.05	57.84
Bra013716.1-P	Field mustard	mitochondrion	58.05	57.84
AT4G23620.2	Thale cress	mitochondrion	58.8	56.68
KRH06647	Soybean	nucleus	45.32	50.21
CDY41659	Canola	plastid	17.98	43.64
TraesCS4A01G235000.1	Wheat	mitochondrion	28.46	32.07
CDY10889	Canola	cytosol	18.35	27.84

Protein Annotations

Gene3D:2.170.120.20	Gene3D:2.40.240.10	MapMan:35.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008097	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0050897	InterPro:IPR020056
InterPro:IPR037121	PFAM:PD012503	PFAM:PF01386	PFAM:PF14693	PANTHER:PTHR33284	InterPro:Rbsml_L25/Gln-tRNA_synth_N
InterPro:Ribosomal_L25	InterPro:Ribosomal_L25/Gln-tRNA_synth	InterPro:Ribosomal_L25_C	InterPro:Ribosomal_L25_b-dom	SUPFAM:SSF50715	EnsemblPlantsGene:TraesCS3A01G212900
EnsemblPlants:TraesCS3A01G212900.1	TIGR:cd00495	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:-:384198309..384200949

Molecular Weight (calculated)

29801.3 Da

IEP (calculated)

10.101

GRAVY (calculated)

-0.291

Length

267 amino acids

Sequence
(BLAST)

001: MLLRRPLQTL TLPLIRRHLS ASAAAVSAPD HNIDELLSPP FDYLPGHPRP DAKHDEVIFA VPRDSSGRHF AAKERKAGRV PAIVFEQENG QEGGNKRLVS
101: VPSKQIRKLV DHLGRSFFLS RLFRLQVWSE QAGQGDLIES VRVLPRKVHL HAGTDEPLNV TFMRAPSSAL LKIDVPLMYI GEDASPGLRK GAYFNTIKRT
201: VKFLCPADIV PPYIEVDLSE LDVGQKLLMR DLIVHPALKL LQSPDQPICS IIGSRAPDQK KEKEKSK

Best Arabidopsis Sequence Match ( AT4G23620.1 )
(BLAST)

001: MLLRRAKTLP KTLQNLRLFS PAANAALSLD HIQETQLTYL PGFPRPDPKH AETILAVPRS VSGKSISAKE RKAGRVPSII FEQEDGQHGG NKRLISVQTN
101: QIRKLVNHLG YSFFLSRLFD VEVRAEIGSD EVIEKVRALP RAIHLHSGTD APLNVTFIRA PPGALLKVDI PLVFIGDDVS PGLKKGASLN TIKRTVKFLC
201: PAEIIPPYIE VDLSQLDIGQ KLVMGDLKVH PALKLIKSKD EPIVKVAGGR VTDTQKKSSD TQKK

Arabidopsis Description

Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JPA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.