Factsheet for Os05t0270000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03203	Sorghum	mitochondrion	89.43	89.77
TraesCS3D01G215300.1	Wheat	mitochondrion	85.66	85.66
TraesCS3B01G243200.1	Wheat	mitochondrion	85.66	85.66
Os01t0593500-00	Rice	mitochondrion	86.79	84.87
TraesCS3A01G212900.1	Wheat	mitochondrion	84.91	84.27
Zm00001d011263_P001	Maize	mitochondrion	81.89	84.11
HORVU3Hr1G051530.1	Barley	plastid	85.66	75.42
GSMUA_Achr2P08360_001	Banana	mitochondrion	69.06	69.85
VIT_02s0025g00620.t01	Wine grape	mitochondrion	61.89	63.57
KRG94894	Soybean	mitochondrion	61.13	63.03
VIT_04s0023g00850.t01	Wine grape	mitochondrion	61.13	62.79
PGSC0003DMT400002340	Potato	mitochondrion	58.87	62.15
PGSC0003DMT400040794	Potato	mitochondrion	53.96	61.9
Solyc11g018560.1.1	Tomato	mitochondrion	58.11	61.11
CDY41665	Canola	mitochondrion	61.13	59.78
CDX98162	Canola	cytosol	30.57	58.7
Bra010538.1-P	Field mustard	mitochondrion	60.0	58.67
CDY24807	Canola	mitochondrion	59.62	58.3
CDY44122	Canola	mitochondrion	58.49	57.84
Bra013716.1-P	Field mustard	mitochondrion	58.49	57.84
CDY57655	Canola	mitochondrion	58.11	57.46
AT4G23620.2	Thale cress	mitochondrion	60.0	57.4
KRH06647	Soybean	nucleus	43.77	48.13
CDY41659	Canola	plastid	16.6	40.0
Os03t0612600-01	Rice	mitochondrion, nucleus	19.62	29.71
CDY10889	Canola	cytosol	19.25	28.98

Protein Annotations

Gene3D:2.170.120.20	Gene3D:2.40.240.10	MapMan:35.2	EntrezGene:4338257	ProteinID:AAV43965.1	EMBL:AK072793
ProteinID:BAF16970.1	ProteinID:BAS93083.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008097	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	InterPro:IPR020056	InterPro:IPR037121
EnsemblPlantsGene:Os05g0270000	EnsemblPlants:Os05t0270000-01	PFAM:PD012503	PFAM:PF01386	PFAM:PF14693	PANTHER:PTHR33284
UniProt:Q5W6B7	InterPro:Rbsml_L25/Gln-tRNA_synth_N	InterPro:Ribosomal_L25	InterPro:Ribosomal_L25/Gln-tRNA_synth	InterPro:Ribosomal_L25_C	InterPro:Ribosomal_L25_b-dom
SUPFAM:SSF50715	SignalP:SignalP-noTM	UniParc:UPI000045494C	RefSeq:XP_015638371.1	SEG:seg	:

Description

Ribosomal protein L25 family protein. (Os05t0270000-01)

Coordinates

chr5:+:10865367..10869233

Molecular Weight (calculated)

29342.1 Da

IEP (calculated)

10.526

GRAVY (calculated)

-0.204

Length

265 amino acids

Sequence
(BLAST)

001: MAMLLRRPLR ALTLPLLRPH LSTAAAAEVS PADHHPDLLS PPFGYLPGHP RPDAKHDELI LAVPRASPGR HVAAKERKAG RVPAIVFEQE NGQEGGNKRL
101: VSVQSKQIRK LVDHLGRSFF LSRLFRLQVW SEHAGQGVLI ESVRVLPRKV HLHAGTDEPL NVTFMRAPSS ALLKIDVPLM FIGDDASPGL RKGAYFNTIK
201: RTVKYLCPAD IVPPYIEVDL SELDVGQKLL MRDLKVHPAL KLLQSPEQPI CSIIGSRAPE QKKSK

Best Arabidopsis Sequence Match ( AT4G23620.1 )
(BLAST)

001: MLLRRAKTLP KTLQNLRLFS PAANAALSLD HIQETQLTYL PGFPRPDPKH AETILAVPRS VSGKSISAKE RKAGRVPSII FEQEDGQHGG NKRLISVQTN
101: QIRKLVNHLG YSFFLSRLFD VEVRAEIGSD EVIEKVRALP RAIHLHSGTD APLNVTFIRA PPGALLKVDI PLVFIGDDVS PGLKKGASLN TIKRTVKFLC
201: PAEIIPPYIE VDLSQLDIGQ KLVMGDLKVH PALKLIKSKD EPIVKVAGGR VTDTQKKSSD TQKK

Arabidopsis Description

Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JPA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.