Factsheet for Os01t0593500-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0270000-01	Rice	mitochondrion	84.87	86.79
EES03203	Sorghum	mitochondrion	84.5	86.74
TraesCS3B01G243200.1	Wheat	mitochondrion	83.03	84.91
TraesCS3D01G215300.1	Wheat	mitochondrion	82.66	84.53
TraesCS3A01G212900.1	Wheat	mitochondrion	82.29	83.52
Zm00001d011263_P001	Maize	mitochondrion	77.86	81.78
HORVU3Hr1G051530.1	Barley	plastid	82.29	74.09
GSMUA_Achr2P08360_001	Banana	mitochondrion	67.53	69.85
VIT_02s0025g00620.t01	Wine grape	mitochondrion	60.89	63.95
VIT_04s0023g00850.t01	Wine grape	mitochondrion	60.52	63.57
KRG94894	Soybean	mitochondrion	60.15	63.42
PGSC0003DMT400002340	Potato	mitochondrion	57.93	62.55
PGSC0003DMT400040794	Potato	mitochondrion	52.77	61.9
Solyc11g018560.1.1	Tomato	mitochondrion	57.56	61.9
CDY41665	Canola	mitochondrion	60.52	60.52
Bra010538.1-P	Field mustard	mitochondrion	59.41	59.41
CDY24807	Canola	mitochondrion	59.04	59.04
CDY44122	Canola	mitochondrion	57.56	58.21
Bra013716.1-P	Field mustard	mitochondrion	57.56	58.21
CDX98162	Canola	cytosol	29.52	57.97
CDY57655	Canola	mitochondrion	57.2	57.84
AT4G23620.2	Thale cress	mitochondrion	58.67	57.4
KRH06647	Soybean	nucleus	44.28	49.79
CDY41659	Canola	plastid	16.97	41.82
Os03t0612600-01	Rice	mitochondrion, nucleus	20.3	31.43
CDY10889	Canola	cytosol	18.82	28.98

Protein Annotations

Gene3D:2.170.120.20	Gene3D:2.40.240.10	MapMan:35.2	EntrezGene:4326383	ProteinID:BAF05375.1	ProteinID:BAS72965.1
ProteinID:EAZ12543.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005840	GO:GO:0006412	GO:GO:0008097	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	InterPro:IPR020056	InterPro:IPR037121	EnsemblPlantsGene:Os01g0593500
EnsemblPlants:Os01t0593500-00	PFAM:PD012503	PFAM:PF01386	PFAM:PF14693	PANTHER:PTHR33284	UniProt:Q0JLK3
InterPro:Rbsml_L25/Gln-tRNA_synth_N	InterPro:Ribosomal_L25	InterPro:Ribosomal_L25/Gln-tRNA_synth	InterPro:Ribosomal_L25_C	InterPro:Ribosomal_L25_b-dom	SUPFAM:SSF50715
UniParc:UPI0000DD8BCD	RefSeq:XP_015626950.1	SEG:seg	:	:	:

Description

Ribosomal protein L25 family protein. (Os01t0593500-00)

Coordinates

chr1:-:23234892..23237624

Molecular Weight (calculated)

30105.7 Da

IEP (calculated)

10.143

GRAVY (calculated)

-0.261

Length

271 amino acids

Sequence
(BLAST)

001: MAMLLRRPLH TLPILPLLGR HLSSSSAAAE AVTADHHHHH DADLLSPPFD YLPGHPRPDA KHDELILAVP RASSGRHVAA KERKAGRVPA IVFEQENGQE
101: GGNKRLVSVQ SKQIRKLVDH LGRSFFLSRL FRLQVWSEHA GQGELIESVR VLPRKVHLHA GTDEPLNVTF MRAPSSALLK IDVPLMFIGE DASPGLRKGA
201: YFNTIKRTVK YLCPADIVPP YIEVDLSELD VGQKLLMRDL KVHPALRLLQ SPEQPICSII GSRAPDQKKS K

Best Arabidopsis Sequence Match ( AT4G23620.1 )
(BLAST)

001: MLLRRAKTLP KTLQNLRLFS PAANAALSLD HIQETQLTYL PGFPRPDPKH AETILAVPRS VSGKSISAKE RKAGRVPSII FEQEDGQHGG NKRLISVQTN
101: QIRKLVNHLG YSFFLSRLFD VEVRAEIGSD EVIEKVRALP RAIHLHSGTD APLNVTFIRA PPGALLKVDI PLVFIGDDVS PGLKKGASLN TIKRTVKFLC
201: PAEIIPPYIE VDLSQLDIGQ KLVMGDLKVH PALKLIKSKD EPIVKVAGGR VTDTQKKSSD TQKK

Arabidopsis Description

Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JPA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.