Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010538.1-P | Field mustard | mitochondrion | 83.03 | 84.87 |
| CDY24807 | Canola | mitochondrion | 82.67 | 84.5 |
| CDY41665 | Canola | mitochondrion | 82.67 | 84.5 |
| Bra013716.1-P | Field mustard | mitochondrion | 79.78 | 82.46 |
| CDY44122 | Canola | mitochondrion | 79.78 | 82.46 |
| CDY57655 | Canola | mitochondrion | 79.06 | 81.72 |
| CDX98162 | Canola | cytosol | 39.35 | 78.99 |
| VIT_04s0023g00850.t01 | Wine grape | mitochondrion | 67.15 | 72.09 |
| VIT_02s0025g00620.t01 | Wine grape | mitochondrion | 67.15 | 72.09 |
| KRG94894 | Soybean | mitochondrion | 66.06 | 71.21 |
| PGSC0003DMT400040794 | Potato | mitochondrion | 57.76 | 69.26 |
| PGSC0003DMT400002340 | Potato | mitochondrion | 62.45 | 68.92 |
| Solyc11g018560.1.1 | Tomato | mitochondrion | 61.37 | 67.46 |
| GSMUA_Achr2P08360_001 | Banana | mitochondrion | 61.37 | 64.89 |
| Zm00001d011263_P001 | Maize | mitochondrion | 57.04 | 61.24 |
| EES03203 | Sorghum | mitochondrion | 57.4 | 60.23 |
| Os05t0270000-01 | Rice | mitochondrion | 57.4 | 60.0 |
| TraesCS3D01G215300.1 | Wheat | mitochondrion | 57.4 | 60.0 |
| TraesCS3B01G243200.1 | Wheat | mitochondrion | 57.04 | 59.62 |
| TraesCS3A01G212900.1 | Wheat | mitochondrion | 56.68 | 58.8 |
| Os01t0593500-00 | Rice | mitochondrion | 57.4 | 58.67 |
| CDY41659 | Canola | plastid | 22.74 | 57.27 |
| KRH06647 | Soybean | nucleus | 49.46 | 56.85 |
| HORVU3Hr1G051530.1 | Barley | plastid | 57.04 | 52.49 |
| CDY10889 | Canola | cytosol | 23.47 | 36.93 |
| AT5G66860.1 | Thale cress | mitochondrion | 29.6 | 32.93 |
Protein Annotations
| Gene3D:2.170.120.20 | MapMan:35.2 | EntrezGene:828462 | ProteinID:AEE84786.1 | ArrayExpress:AT4G23620 | EnsemblPlantsGene:AT4G23620 |
| RefSeq:AT4G23620 | TAIR:AT4G23620 | RefSeq:AT4G23620-TAIR-G | EnsemblPlants:AT4G23620.2 | TAIR:AT4G23620.2 | Unigene:At.2561 |
| UniProt:F4JPA3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0003824 |
| GO:GO:0004812 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008097 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022625 |
| GO:GO:0050897 | InterPro:IPR037121 | RefSeq:NP_001190814.1 | PFAM:PF01386 | PFAM:PF14693 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33284 | InterPro:Ribosomal_L25 |
| InterPro:Ribosomal_L25/Gln-tRNA_synth | InterPro:Ribosomal_L25_C | InterPro:Ribosomal_L25_b-dom | SUPFAM:SSF50715 | UniParc:UPI0001E92FD8 | : |
Description
Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JPA3]
Coordinates
chr4:-:12314776..12316702
Molecular Weight (calculated)
30505.6 Da
IEP (calculated)
10.665
GRAVY (calculated)
-0.154
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLRRAKTLP KTLQNLRLFS PAANAALSLD HIQETQLTYL PGFPRPDPKH AETILAVPRS VSGKSISAKE RKAGRVPSII FEQEDGQHGG NKRLISVQTN
101: QIRKLVNHLG YSFFLSRLFD VEVRAEIGSD EVIEKVRALP RAVKSPFLSL MKLIKIHLHS GTDAPLNVTF IRAPPGALLK VDIPLVFIGD DVSPGLKKGA
201: SLNTIKRTVK FLCPAEIIPP YIEVDLSQLD IGQKLVMGDL KVHPALKLIK SKDEPIVKVA GGRVTDTQKK SSDTQKK
101: QIRKLVNHLG YSFFLSRLFD VEVRAEIGSD EVIEKVRALP RAVKSPFLSL MKLIKIHLHS GTDAPLNVTF IRAPPGALLK VDIPLVFIGD DVSPGLKKGA
201: SLNTIKRTVK FLCPAEIIPP YIEVDLSQLD IGQKLVMGDL KVHPALKLIK SKDEPIVKVA GGRVTDTQKK SSDTQKK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.