CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94894	Soybean	mitochondrion	75.93	71.21
VIT_04s0023g00850.t01	Wine grape	mitochondrion	60.17	56.2
VIT_02s0025g00620.t01	Wine grape	mitochondrion	59.75	55.81
PGSC0003DMT400040794	Potato	mitochondrion	50.21	52.38
Solyc11g018560.1.1	Tomato	mitochondrion	53.94	51.59
PGSC0003DMT400002340	Potato	mitochondrion	53.11	51.0
AT4G23620.2	Thale cress	mitochondrion	56.85	49.46
Bra010538.1-P	Field mustard	mitochondrion	54.77	48.71
CDY41665	Canola	mitochondrion	54.77	48.71
CDY24807	Canola	mitochondrion	54.36	48.34
CDY44122	Canola	mitochondrion	53.53	48.13
Bra013716.1-P	Field mustard	mitochondrion	53.53	48.13
GSMUA_Achr2P08360_001	Banana	mitochondrion	52.28	48.09
CDY57655	Canola	mitochondrion	53.11	47.76
Zm00001d011263_P001	Maize	mitochondrion	50.21	46.9
TraesCS3B01G243200.1	Wheat	mitochondrion	50.62	46.04
TraesCS3D01G215300.1	Wheat	mitochondrion	50.62	46.04
TraesCS3A01G212900.1	Wheat	mitochondrion	50.21	45.32
EES03203	Sorghum	mitochondrion	48.96	44.7
Os01t0593500-00	Rice	mitochondrion	49.79	44.28
Os05t0270000-01	Rice	mitochondrion	48.13	43.77
HORVU3Hr1G051530.1	Barley	plastid	51.87	41.53
CDX98162	Canola	cytosol	18.67	32.61
KRH57744	Soybean	mitochondrion	25.73	25.2
KRH04667	Soybean	mitochondrion	17.01	22.04
CDY41659	Canola	plastid	4.98	10.91
CDY10889	Canola	cytosol	7.88	10.8

Protein Annotations

MapMan:35.2	UniProt:A0A0R0FKZ9	EMBL:ACUP02009855	EnsemblPlantsGene:GLYMA_16G036900	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008097	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlants:KRH06647	ProteinID:KRH06647
ProteinID:KRH06647.1	PFAM:PF01386	PANTHER:PTHR33284	InterPro:Ribosomal_L25	InterPro:Ribosomal_L25/Gln-tRNA_synth	SUPFAM:SSF50715
UniParc:UPI0006ED9FBD	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:3507857..3510890

Molecular Weight (calculated)

26783.4 Da

IEP (calculated)

10.695

GRAVY (calculated)

-0.374

Length

241 amino acids

Sequence
(BLAST)

001: MTKPQSLGAS EVSERASEAP QPLSQPKTSL QPITIMYLPR HHILTRLSPY RRHFSHSAAA VLRPPEPEPL TYLDGFPRPD PKHDETILAV PRADSGKNIS
101: AKERRAGRLP SIVFEQEDGQ HGGNKRLISV RTDQIRKLVN HLGRSFFLSR LFLLEVRSGF DSENDVVETV RVLPRAIHLK AGTDAPLNVT FIRAPSDALL
201: KVDVPLVFRG EDVSPGLKKG LSTWPGKSSG HRLNLMLVGF M

Best Arabidopsis Sequence Match ( AT4G23620.1 )
(BLAST)

001: MLLRRAKTLP KTLQNLRLFS PAANAALSLD HIQETQLTYL PGFPRPDPKH AETILAVPRS VSGKSISAKE RKAGRVPSII FEQEDGQHGG NKRLISVQTN
101: QIRKLVNHLG YSFFLSRLFD VEVRAEIGSD EVIEKVRALP RAIHLHSGTD APLNVTFIRA PPGALLKVDI PLVFIGDDVS PGLKKGASLN TIKRTVKFLC
201: PAEIIPPYIE VDLSQLDIGQ KLVMGDLKVH PALKLIKSKD EPIVKVAGGR VTDTQKKSSD TQKK

Arabidopsis Description

Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JPA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.