CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57744	Soybean	mitochondrion	75.81	57.32
VIT_00s1247g00020.t01	Wine grape	mitochondrion	59.68	44.94
Solyc02g090420.2.1	Tomato	endoplasmic reticulum	58.06	44.63
VIT_07s0197g00010.t01	Wine grape	mitochondrion, plastid	59.14	44.18
PGSC0003DMT400026094	Potato	mitochondrion, plastid	58.6	43.78
Bra037144.1-P	Field mustard	cytosol	46.77	43.5
AT5G66860.1	Thale cress	mitochondrion	58.06	43.37
CDY71642	Canola	mitochondrion	45.16	41.79
CDY12782	Canola	mitochondrion	54.3	40.73
CDY01458	Canola	mitochondrion	54.3	40.56
Bra012111.1-P	Field mustard	mitochondrion	53.76	40.16
CDX81361	Canola	mitochondrion	37.1	40.12
Zm00001d013730_P001	Maize	mitochondrion	46.24	35.98
EER91230	Sorghum	mitochondrion	45.7	35.42
TraesCS4A01G235000.1	Wheat	mitochondrion	44.09	34.6
TraesCS4B01G080000.1	Wheat	mitochondrion	44.09	34.6
TraesCS4D01G078900.1	Wheat	mitochondrion	44.09	34.6
HORVU4Hr1G013640.1	Barley	mitochondrion	44.09	34.6
Os03t0612600-01	Rice	mitochondrion, nucleus	25.27	26.86
KRG94894	Soybean	mitochondrion	33.87	24.51
KRH06647	Soybean	nucleus	22.04	17.01

Protein Annotations

Gene3D:2.170.120.20	MapMan:35.2	EMBL:ACUP02010473	EnsemblPlantsGene:GLYMA_17G178000	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008097	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	InterPro:IPR037121	UniProt:K7MM89
EnsemblPlants:KRH04667	ProteinID:KRH04667	ProteinID:KRH04667.1	PFAM:PF14693	PANTHER:PTHR33284	PANTHER:PTHR33284:SF2
InterPro:Ribosomal_L25/Gln-tRNA_synth	InterPro:Ribosomal_L25_C	InterPro:Ribosomal_L25_b-dom	SUPFAM:SSF50715	UniParc:UPI00029696DD	:

Description

hypothetical protein

Coordinates

chr17:-:19168489..19173786

Molecular Weight (calculated)

20833.3 Da

IEP (calculated)

8.978

GRAVY (calculated)

-0.262

Length

186 amino acids

Sequence
(BLAST)

001: MTFFRKYFVD TSGSHKFFFR KKPRPEPKTP NLNSADAPFF CSTRFPLQIR AGSGSSHLPE SGTVLPIKIH RDEESGKILN LVFVWAEDGM KLKVDVPVVF
101: KGEDACPGVQ KGGILNKIRP SLRFLCPSEH IPSNIAVDVS NLDIEDRIFM RDIEVHPSLK LLSKNENMPV CKIVPTSLGN KEPIEA

Best Arabidopsis Sequence Match ( AT5G66860.1 )
(BLAST)

001: MAKWWRGLRS VTAEVADLPA SSFGRSIRCI HQYQTIQAIP REATGRGVSA RDRTIGRIPA VVFPQSLLDT DASKRGVSRK QLLTADKKQI KSIIDSVGLP
101: FFCSTTFQLQ IRAGQGSSTL VESGRVLPLK VHRDEETGKI LNLVFVWADD GEKLKVDVPV VFKGLDHCPG LQKGGNLRTI RSTLKLLGPA EHIPSKIEVD
201: VSNLDIEDKV LLQDVVFHPS LKLLSKNETM PVCKIVATSP VKEPEAVQA

Arabidopsis Description

Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FKZ4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.