Factsheet for HORVU3Hr1G051530.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G212900.1	Wheat	mitochondrion	87.04	98.13
TraesCS3D01G215300.1	Wheat	mitochondrion	86.05	97.74
TraesCS3B01G243200.1	Wheat	mitochondrion	86.05	97.74
EES03203	Sorghum	mitochondrion	75.75	86.36
Os05t0270000-01	Rice	mitochondrion	75.42	85.66
Zm00001d011263_P001	Maize	mitochondrion	72.09	84.11
Os01t0593500-00	Rice	mitochondrion	74.09	82.29
GSMUA_Achr2P08360_001	Banana	mitochondrion	59.14	67.94
VIT_04s0023g00850.t01	Wine grape	mitochondrion	55.81	65.12
VIT_02s0025g00620.t01	Wine grape	mitochondrion	55.81	65.12
KRG94894	Soybean	mitochondrion	55.15	64.59
PGSC0003DMT400040794	Potato	mitochondrion	49.5	64.5
PGSC0003DMT400002340	Potato	mitochondrion	52.82	63.35
Solyc11g018560.1.1	Tomato	mitochondrion	52.49	62.7
CDY41665	Canola	mitochondrion	55.15	61.25
Bra010538.1-P	Field mustard	mitochondrion	54.49	60.52
CDY24807	Canola	mitochondrion	54.15	60.15
CDX98162	Canola	cytosol	27.57	60.14
CDY57655	Canola	mitochondrion	51.49	57.84
CDY44122	Canola	mitochondrion	51.49	57.84
Bra013716.1-P	Field mustard	mitochondrion	51.49	57.84
AT4G23620.2	Thale cress	mitochondrion	52.49	57.04
KRH06647	Soybean	nucleus	41.53	51.87
CDY41659	Canola	plastid	15.95	43.64
HORVU4Hr1G013640.1	Barley	mitochondrion	25.91	32.91
CDY10889	Canola	cytosol	16.28	27.84

Protein Annotations

Gene3D:2.170.120.20	Gene3D:2.40.240.10	MapMan:35.2	UniProt:A0A287L1G4	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008097	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0050897
EnsemblPlantsGene:HORVU3Hr1G051530	EnsemblPlants:HORVU3Hr1G051530.1	InterPro:IPR020056	InterPro:IPR037121	PFAM:PD012503	PFAM:PF01386
PFAM:PF14693	PANTHER:PTHR33284	InterPro:Rbsml_L25/Gln-tRNA_synth_N	InterPro:Ribosomal_L25	InterPro:Ribosomal_L25/Gln-tRNA_synth	InterPro:Ribosomal_L25_C
InterPro:Ribosomal_L25_b-dom	SUPFAM:SSF50715	UniParc:UPI000B4806D7	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:373098124..373103946

Molecular Weight (calculated)

33673.8 Da

IEP (calculated)

10.356

GRAVY (calculated)

-0.421

Length

301 amino acids

Sequence
(BLAST)

001: SPRTPKDGHH HRRLAFFFPP PKNPTPRDDQ PAAAMLLRRP LQALTLPLIR RHFSASAAAV SAPDHNIDEL LSPPFDYLPG HPRPDAKHDE VIFAVPRDNS
101: GRHFAAKERK AGRVPAIVFE QENGQEGGNK RLVSVSSKQI RKLVDHLGRS FFLSRLFRLQ VWSEHAGQGD LIESVRVLPR KVHLHAGTDE PLNVTFMRAP
201: SSALLKIDVP LMYIGEDASP GLRKGAYFNT IKRTVKFLCP ADIVPPYIEV DLSELDVGQK LLMRDLIVHP ALKLLQSPDQ PICSIIGSRA PDQKKEKEKS
301: K

Best Arabidopsis Sequence Match ( AT4G23620.1 )
(BLAST)

001: MLLRRAKTLP KTLQNLRLFS PAANAALSLD HIQETQLTYL PGFPRPDPKH AETILAVPRS VSGKSISAKE RKAGRVPSII FEQEDGQHGG NKRLISVQTN
101: QIRKLVNHLG YSFFLSRLFD VEVRAEIGSD EVIEKVRALP RAIHLHSGTD APLNVTFIRA PPGALLKVDI PLVFIGDDVS PGLKKGASLN TIKRTVKFLC
201: PAEIIPPYIE VDLSQLDIGQ KLVMGDLKVH PALKLIKSKD EPIVKVAGGR VTDTQKKSSD TQKK

Arabidopsis Description

Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JPA3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.