Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d044016_P001 | Maize | mitochondrion | 95.11 | 95.11 |
| HORVU3Hr1G059140.1 | Barley | peroxisome | 90.38 | 89.97 |
| TraesCS3D01G237900.1 | Wheat | peroxisome | 90.08 | 89.67 |
| TraesCS3B01G266100.1 | Wheat | golgi | 90.08 | 89.67 |
| TraesCS3A01G237700.3 | Wheat | peroxisome | 88.55 | 86.44 |
| Os01t0655800-01 | Rice | plasma membrane | 84.73 | 81.62 |
| KXG27302 | Sorghum | cytosol | 6.11 | 74.07 |
| GSMUA_Achr6P14370_001 | Banana | peroxisome | 73.89 | 73.89 |
| EES01271 | Sorghum | peroxisome | 73.59 | 72.81 |
| OQU75859 | Sorghum | peroxisome | 68.55 | 69.18 |
| KXG19348 | Sorghum | peroxisome | 66.56 | 67.18 |
| OQU82479 | Sorghum | peroxisome | 68.24 | 61.83 |
| KXG28707 | Sorghum | peroxisome | 59.08 | 58.2 |
| KXG21217 | Sorghum | peroxisome | 49.77 | 48.66 |
| EES15543 | Sorghum | peroxisome | 40.61 | 39.0 |
| KXG27718 | Sorghum | peroxisome | 40.76 | 38.31 |
| KXG23059 | Sorghum | endoplasmic reticulum | 33.44 | 31.38 |
| OQU82968 | Sorghum | endoplasmic reticulum, plasma membrane | 32.67 | 30.7 |
| KXG27640 | Sorghum | peroxisome | 33.44 | 30.17 |
| KXG37146 | Sorghum | plastid | 21.98 | 19.51 |
Protein Annotations
| EnsemblPlants:EES01192 | EnsemblPlantsGene:SORBI_3003G242000 | EntrezGene:8058259 | Gene3D:3.40.50.12780 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | InterPro:AMP-binding_CS | InterPro:AMP-dep_Synth/Lig | PANTHER:PTHR43272 | PANTHER:PTHR43272:SF9 |
| PFAM:PF00501 | ProteinID:EES01192 | ProteinID:EES01192.1 | RefSeq:XP_002456072.1 | ScanProsite:PS00455 | SUPFAM:SSF56801 |
| unigene:Sbi.8327 | UniParc:UPI0001A844F4 | UniProt:C5XFA1 | MapMan:50.6.2 | : | : |
Description
hypothetical protein
Coordinates
chr3:+:58133194..58141053
Molecular Weight (calculated)
72741.7 Da
IEP (calculated)
5.880
GRAVY (calculated)
-0.095
Length
655 amino acids
Sequence
(BLAST)
(BLAST)
001: MQNVVEVEPG RPAADGRPSV GPTYRSAYAR DGFPPPVPGM DCCYDIFRMA VEKYPNNRML GHREIVDGKA GAYVWKTYNE VFDIANKIGN SIRSCGLAKG
101: SRCGIYGANC PEWIITMEAC NAHGIYCVPL YDTLGAGAIE FILCHAEVEI AFAEEKKIEL LVKTLPKSNE FLKTIVSFGK VTQEQKEEVR KYGLSVYSWD
201: EFLSLAADQE FDLPVKEKSD ICTIMYTSGT TGDPKGVLIS NASIICLIAG VDRLLSSQNE ELAESDVYMS YLPLAHIFDR VVEELFIFHG ASIGFWRGDV
301: KLLVEDIGVL KPTIMCAVPR VLDRIFSGLQ AKISSGGFLK STLFNVAYKF KHFRMMRGAK HNEAASICDK VVFSKVKEGL GGNVRVILSG AAPLATHVEE
401: YLRVVTCAHV LQGYGLTETC AGSFVSLPNQ MSMIGTVGPP VPNIDVRLES VPEMDYDALA STPRGEICIR GETLFSGYYK REDLTKEVLI DGWFHTGDIG
501: EWQPDGCMKI IDRKKNIFKL SQGEYVAVEN LENVYGLVSA SDSIWVYGNS FESFLVAVVN PNKEALESWA AANGISGDFE SLCKNPKAKE YILGELSRIG
601: KEKKLKGFEF IKDVHLEPVP FDMDRDLITP TYKKKRPQLL KYYQGVIDNM YKSAK
101: SRCGIYGANC PEWIITMEAC NAHGIYCVPL YDTLGAGAIE FILCHAEVEI AFAEEKKIEL LVKTLPKSNE FLKTIVSFGK VTQEQKEEVR KYGLSVYSWD
201: EFLSLAADQE FDLPVKEKSD ICTIMYTSGT TGDPKGVLIS NASIICLIAG VDRLLSSQNE ELAESDVYMS YLPLAHIFDR VVEELFIFHG ASIGFWRGDV
301: KLLVEDIGVL KPTIMCAVPR VLDRIFSGLQ AKISSGGFLK STLFNVAYKF KHFRMMRGAK HNEAASICDK VVFSKVKEGL GGNVRVILSG AAPLATHVEE
401: YLRVVTCAHV LQGYGLTETC AGSFVSLPNQ MSMIGTVGPP VPNIDVRLES VPEMDYDALA STPRGEICIR GETLFSGYYK REDLTKEVLI DGWFHTGDIG
501: EWQPDGCMKI IDRKKNIFKL SQGEYVAVEN LENVYGLVSA SDSIWVYGNS FESFLVAVVN PNKEALESWA AANGISGDFE SLCKNPKAKE YILGELSRIG
601: KEKKLKGFEF IKDVHLEPVP FDMDRDLITP TYKKKRPQLL KYYQGVIDNM YKSAK
001: MSQQKKYIFQ VEEGKEGSDG RPSVGPVYRS IFAKDGFPDP IEGMDSCWDV FRMSVEKYPN NPMLGRREIV DGKPGKYVWQ TYQEVYDIVM KLGNSLRSVG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG
Arabidopsis Description
LACS4Long chain acyl-CoA synthetase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.