Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01271 | Sorghum | peroxisome | 80.22 | 87.61 |
| Os01t0681200-01 | Rice | plasma membrane | 74.41 | 80.9 |
| TraesCS5B01G147300.1 | Wheat | peroxisome | 72.75 | 79.46 |
| TraesCS5A01G148700.1 | Wheat | peroxisome | 72.89 | 79.01 |
| TraesCS5D01G144200.2 | Wheat | peroxisome | 72.61 | 78.71 |
| HORVU5Hr1G046950.26 | Barley | peroxisome | 73.03 | 77.53 |
| GSMUA_Achr3P32060_001 | Banana | peroxisome | 65.01 | 71.76 |
| EES01192 | Sorghum | peroxisome | 61.83 | 68.24 |
| OQU75859 | Sorghum | peroxisome | 59.2 | 65.95 |
| KXG19348 | Sorghum | peroxisome | 58.51 | 65.18 |
| KXG28707 | Sorghum | peroxisome | 50.62 | 55.04 |
| KXG21217 | Sorghum | peroxisome | 42.88 | 46.27 |
| EES15543 | Sorghum | peroxisome | 35.27 | 37.39 |
| KXG27718 | Sorghum | peroxisome | 34.16 | 35.44 |
| KXG27302 | Sorghum | cytosol | 2.63 | 35.19 |
| OQU82968 | Sorghum | endoplasmic reticulum, plasma membrane | 30.01 | 31.13 |
| KXG23059 | Sorghum | endoplasmic reticulum | 29.88 | 30.95 |
| KXG27640 | Sorghum | peroxisome | 29.46 | 29.34 |
| KXG37146 | Sorghum | plastid | 21.02 | 20.6 |
Protein Annotations
| EnsemblPlants:OQU82479 | EnsemblPlantsGene:SORBI_3006G247300 | Gene3D:3.40.50.12780 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | InterPro:AMP-binding_CS | InterPro:AMP-dep_Synth/Lig | PANTHER:PTHR43272 | PANTHER:PTHR43272:SF9 | PFAM:PF00501 |
| ProteinID:OQU82479 | ProteinID:OQU82479.1 | ScanProsite:PS00455 | SUPFAM:SSF56801 | UniParc:UPI000B8BACD5 | UniProt:A0A1Z5RFW5 |
| MapMan:50.6.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:58649102..58662465
Molecular Weight (calculated)
80308.2 Da
IEP (calculated)
5.225
GRAVY (calculated)
-0.113
Length
723 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAGSMKHLV EVEPAKEAAG GAPSAGPTYR CAAADNGASP PALPGLDSCW DIFRLSVEKY PDNNMLGRRE IVDGKAGSYT WLTYKQVYDT VLKVGAAIRS
101: CGVAKGGRCG IYGANSPEWV ISMQACNALG IYCVPLYDTL GAGAVEFVLC HAEVQIAFVE EKKIGEMVKT FPNATKYLKT IVSFGKVDLG HKEKVEQNGL
201: SIYSWEEFLQ LGGEEKFELP PKEKDGICTI MYTSGTTGDP KGVLISNKSI VTIVSAIYEF LSNSNEQLHE DDVYISYLPL AHIFDRVLEE VFIHHGASIG
301: FWRGDVKLLV EDIGELKPTI FCAVPRVLGR IYGGLQDKIT AGGFLKKTLF NVAYKYKLGN MLKGSKHEEA AAVFDKLVFT KVKWGLGGRV RLIISGGAPL
401: SRHVEEYLRV VTCSHVLQAY GLTETCGSFI SLPNNMSMLG TVGPPLPHVE VRLESVPEMG YDAVSSETPR GEICIKGDTL FLGYYKREDL TNEVLVDGWF
501: HTGDIGEWQF DGSMKIIDRK KNIFKLSQGE YVAVENIENI FGQTPGVDSI WVYGNSFESS LVTVVNPNKQ ALEHWAQTNG VTGDFATICE DPKVKEFILR
601: ELTKTGKENK LLYPILRIFG ERDRVRWVAE ASEDVAEPFL QGFPEVVSSS PLEDLPSDFV EGSYVTPVTF KRGDLYARGY LIDWWRYKYP TRSIDDLVDF
701: LVRDYCDDLR LFPDSYVRIV RGS
101: CGVAKGGRCG IYGANSPEWV ISMQACNALG IYCVPLYDTL GAGAVEFVLC HAEVQIAFVE EKKIGEMVKT FPNATKYLKT IVSFGKVDLG HKEKVEQNGL
201: SIYSWEEFLQ LGGEEKFELP PKEKDGICTI MYTSGTTGDP KGVLISNKSI VTIVSAIYEF LSNSNEQLHE DDVYISYLPL AHIFDRVLEE VFIHHGASIG
301: FWRGDVKLLV EDIGELKPTI FCAVPRVLGR IYGGLQDKIT AGGFLKKTLF NVAYKYKLGN MLKGSKHEEA AAVFDKLVFT KVKWGLGGRV RLIISGGAPL
401: SRHVEEYLRV VTCSHVLQAY GLTETCGSFI SLPNNMSMLG TVGPPLPHVE VRLESVPEMG YDAVSSETPR GEICIKGDTL FLGYYKREDL TNEVLVDGWF
501: HTGDIGEWQF DGSMKIIDRK KNIFKLSQGE YVAVENIENI FGQTPGVDSI WVYGNSFESS LVTVVNPNKQ ALEHWAQTNG VTGDFATICE DPKVKEFILR
601: ELTKTGKENK LLYPILRIFG ERDRVRWVAE ASEDVAEPFL QGFPEVVSSS PLEDLPSDFV EGSYVTPVTF KRGDLYARGY LIDWWRYKYP TRSIDDLVDF
701: LVRDYCDDLR LFPDSYVRIV RGS
001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA
Arabidopsis Description
LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.