Factsheet for HORVU5Hr1G046950.26

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G144200.2	Wheat	peroxisome	95.59	97.6
TraesCS5B01G147300.1	Wheat	peroxisome	94.71	97.43
TraesCS5A01G148700.1	Wheat	peroxisome	95.15	97.15
Os01t0681200-01	Rice	plasma membrane	86.34	88.42
EES01271	Sorghum	peroxisome	83.99	86.4
Zm00001d043851_P001	Maize	mitochondrion	83.11	85.24
GSMUA_Achr3P32060_001	Banana	peroxisome	73.57	76.49
HORVU3Hr1G059140.1	Barley	peroxisome	71.81	74.32
VIT_02s0025g01410.t01	Wine grape	peroxisome	71.66	73.72
OQU82479	Sorghum	peroxisome	77.53	73.03
KRH27846	Soybean	peroxisome	69.9	71.79
KRH77642	Soybean	endoplasmic reticulum	70.04	71.09
Bra033159.1-P	Field mustard	peroxisome	62.41	70.36
Bra013735.1-P	Field mustard	peroxisome	63.73	69.66
KRH60037	Soybean	peroxisome	66.81	68.42
CDY47618	Canola	peroxisome	66.96	68.37
AT4G23850.1	Thale cress	peroxisome	66.81	68.32
CDX86825	Canola	peroxisome	66.81	68.32
CDY03515	Canola	peroxisome	66.81	68.22
Bra035259.1-P	Field mustard	peroxisome	66.67	68.17
AT4G11030.1	Thale cress	peroxisome	66.08	67.57
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	65.49	67.07
CDX94232	Canola	peroxisome	63.73	65.66
CDY25270	Canola	peroxisome	63.29	65.4
CDY40856	Canola	peroxisome	66.67	61.94
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	63.44	60.5
KRG94065	Soybean	vacuole	16.01	59.56
HORVU5Hr1G099350.15	Barley	peroxisome	58.15	59.28
CDY46530	Canola	peroxisome	67.25	58.27
KRH41306	Soybean	peroxisome	21.59	57.42
Bra027700.1-P	Field mustard	peroxisome	67.69	55.81
CDY64879	Canola	peroxisome	67.69	48.02
HORVU1Hr1G016200.16	Barley	peroxisome	46.99	41.03
HORVU5Hr1G040740.17	Barley	peroxisome	37.15	35.38
HORVU4Hr1G025820.9	Barley	peroxisome, plastid	38.62	35.07
HORVU1Hr1G027510.1	Barley	cytosol	2.64	33.33
HORVU4Hr1G019780.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	32.75	31.99
HORVU5Hr1G036460.1	Barley	endoplasmic reticulum	31.42	30.66
HORVU5Hr1G052100.13	Barley	peroxisome	30.69	28.44
HORVU5Hr1G120850.1	Barley	plastid	23.2	23.07
HORVU1Hr1G032500.2	Barley	peroxisome	3.96	17.09

Protein Annotations

EnsemblPlants:HORVU5Hr1G046950.26	EnsemblPlantsGene:HORVU5Hr1G046950	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ncoils:Coil	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9
PFAM:PF00501	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801	UniParc:UPI000B480BA2	UniProt:A0A287R286
MapMan:50.6.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:364276874..364282991

Molecular Weight (calculated)

74538.7 Da

IEP (calculated)

6.315

GRAVY (calculated)

-0.172

Length

681 amino acids

Sequence
(BLAST)

001: MADATMKYLV QVAEGREAAP EEGGAPSAGP AYRCAAGTGG AAPPAGPGLG AXXXAPPPAV PGLESCWDIF RLSVEKYPGN PMMGRREIVD GKAGKYTWVT
101: YKEVYDTVIK VGASIRSCGV NKGGRCGIYG GNSPEWVVSM QACNAHGIYC VPLYDTLGAG AIEFILCHAE VEIAFVEEKK IGEILKTLPN ATKFLKTIVS
201: FGKVSPDQKE KVEQNGLSIY SWTEFVLKGD GAEEKYELPP KDKADICTIM YTSGTTGDPK GVLISNKSII TIVSAVDEFL RNSNEQIRED DVYISYLPLA
301: HIFDRVIEEV FIHHGASIGF WRGDVKLLVE DIGELKPTIF CAVPRVLDRI YGGLQDKVST GGFLKKTLFN VAYKYKQGNM IKGSKHEDAA SIFDKLVFTK
401: VKRGLGGRVR VILSGAAPLS NHVEEFLRVV TCSHVLQGYG LTETCAGSFV SLPNNMSMLG TVGPPVPYVE VHLESVPEMG YDALSKESPR GEICIRGDTL
501: FSGYYKREDL TKEVLVDGWF HTGDIGEWQY DGSMKIIDRK KNIFKLSQGE YVAVENLENI FGQAPNVDSI WVYGNSFESC LVAVINPNKQ GLERWAGLNG
601: VSGDFASICG DPKAKEFILE ELNKTGKDKK LKGFEMIRAV HLEPVLFDME RDLITPTYKK KRPQLLKYYQ GIIDDMYKSM K

Best Arabidopsis Sequence Match ( AT4G23850.1 )
(BLAST)

001: MSQQKKYIFQ VEEGKEGSDG RPSVGPVYRS IFAKDGFPDP IEGMDSCWDV FRMSVEKYPN NPMLGRREIV DGKPGKYVWQ TYQEVYDIVM KLGNSLRSVG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG

Arabidopsis Description

LACS4Long chain acyl-CoA synthetase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.