Factsheet for Bra027700.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	73.73	91.58
CDY64879	Canola	peroxisome	97.94	84.27
CDY46530	Canola	peroxisome	79.54	83.59
Bra013735.1-P	Field mustard	peroxisome	55.33	73.35
KRH77642	Soybean	endoplasmic reticulum	58.96	72.58
VIT_02s0025g01410.t01	Wine grape	peroxisome	57.87	72.21
Bra033159.1-P	Field mustard	peroxisome	52.66	72.02
KRH27846	Soybean	peroxisome	57.75	71.95
Bra035259.1-P	Field mustard	peroxisome	57.75	71.62
Solyc08g082280.2.1	Tomato	nucleus, plastid	56.9	71.43
GSMUA_Achr3P32060_001	Banana	peroxisome	56.42	71.14
Solyc08g008310.2.1	Tomato	peroxisome	51.09	70.69
GSMUA_Achr6P14370_001	Banana	peroxisome	55.93	70.53
HORVU3Hr1G059140.1	Barley	peroxisome	55.45	69.6
TraesCS3D01G237900.1	Wheat	peroxisome	55.45	69.6
TraesCS3B01G266100.1	Wheat	golgi	55.45	69.6
Zm00001d044016_P001	Maize	mitochondrion	55.08	69.47
TraesCS5B01G147300.1	Wheat	peroxisome	55.45	69.18
KRH60037	Soybean	peroxisome	55.69	69.17
TraesCS5A01G148700.1	Wheat	peroxisome	55.57	68.82
TraesCS5D01G144200.2	Wheat	peroxisome	55.57	68.82
Os01t0681200-01	Rice	plasma membrane	55.21	68.57
KXG27302	Sorghum	cytosol	4.48	68.52
Zm00001d043851_P001	Maize	mitochondrion	54.48	67.77
HORVU5Hr1G046950.26	Barley	peroxisome	55.81	67.69
TraesCS3A01G237700.3	Wheat	peroxisome	54.72	67.36
PGSC0003DMT400014954	Potato	cytosol	9.32	66.38
TraesCS7D01G110700.1	Wheat	peroxisome	50.73	64.46
Os06t0158000-01	Rice	plasma membrane	47.7	64.06
TraesCS7B01G012700.1	Wheat	peroxisome	50.36	64.0
TraesCS7A01G115900.1	Wheat	peroxisome	48.55	63.55
Zm00001d045295_P001	Maize	extracellular	51.82	63.41
Os01t0655800-01	Rice	plasma membrane	51.94	63.09
KRH41306	Soybean	peroxisome	19.49	62.89
KRG94065	Soybean	vacuole	13.2	59.56
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	50.12	57.98
Bra032284.1-P	Field mustard	peroxisome	42.62	52.85
Bra021392.1-P	Field mustard	peroxisome	40.07	50.15
Bra004467.1-P	Field mustard	peroxisome	39.59	46.92
Bra020793.1-P	Field mustard	plastid	27.84	36.57
Bra001177.1-P	Field mustard	plastid	30.63	36.35
Bra009951.1-P	Field mustard	peroxisome	29.9	35.39
Bra003678.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	25.54	30.45
Bra013210.1-P	Field mustard	peroxisome	25.79	29.54
Bra001919.1-P	Field mustard	plastid	18.4	21.17
Bra032757.1-P	Field mustard	plastid	17.55	20.17

Protein Annotations

Gene3D:3.40.50.12780	MapMan:50.6.2	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:Bra027700	EnsemblPlants:Bra027700.1
EnsemblPlants:Bra027700.1-P	GO:GO:0001676	GO:GO:0003674	GO:GO:0003824	GO:GO:0004467	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	UniProt:M4EFY7	PFAM:PF00501	ScanProsite:PS00455	PANTHER:PTHR43272
PANTHER:PTHR43272:SF9	SUPFAM:SSF56801	UniParc:UPI000254230F	SEG:seg	:	:

Description

AT1G64400 (E=0.0) | long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative

Coordinates

chrA09:+:6830266..6835745

Molecular Weight (calculated)

92448.0 Da

IEP (calculated)

9.490

GRAVY (calculated)

-0.435

Length

826 amino acids

Sequence
(BLAST)

001: MATDRFIVEV EKGKEGVDGG SPSVGSVYRS IYAKDGFPEP ADDLLSCWDI FRASASTPPE HHQRDPRSSE LRSRQASNEP ITRGALQASA LRNQKPAKAN
101: LKETPFPETR AGDGGSEQAS TSRKPPPLNM QAAPSPPVTS RRTRRCSTNR ATVRDSGGTR GRTRRSMTGR RRRSDGKPLR RTKKGLRRRH GRSRADRTPV
201: PKTDLTSLSF LSLSFKIDLS AEKSPDNPML GRREIVDGKA GKYVWQTYKE VYDIVIKLGN SIRTIGVGKG EKCGIYGANS PEWIISMEAC NAHGLYCVPL
301: YDTLGAGAIE FIICHAEVSL AFSEEKKISE LLKTAPNSTK YLKNIVSFGE VSNVQRAEAE RHGLSIYSWD QFLKLGEGKH YELPEKKRSD ICTIMYTSGT
401: TGDPKGVLLT NESIIYLLEG VKKLLKTINE ELTSKDVYLS YLPLAHIFDR VIEELFIYEA ASIGFWRGDV KILVEDIAAL KPTIFCAVPR VLERIYNGLQ
501: QKLSDGGFLK KTLFNFAFNY KHNNMVKGKA HEQAAPIFDK IVFKKVKEGL GGRVRLILSG AAPLAAHIES FLRVVACAHV LQGYGLTESC GGTFVSIPNE
601: LQMLGTVGPP VPNVDIRLES VPEMGYDALA SKPRGEICIR GKTLFSGYYK REDLTQEVFI DGWLHTGDVG EWQPDGAMKI IDRKKNIFKL SQGEYVAVEN
701: LENIYSHVAA IESIWVYGNS YESYLVAVVC PSKIQIEHWA KEHNVSGDFE TICQNQKTKE FILGEFNRVA KDKKLKGFEL IKGVHLDTVP FDMERDLITP
801: SYKKKRPQLL KYYQKEIDEM YNKTKN

Best Arabidopsis Sequence Match ( AT1G64400.1 )
(BLAST)

001: MATGRYIVEV EKGKQGVDGG SPSVGPVYRS IYAKDGFPEP PDDLVSAWDI FRLSVEKSPN NPMLGRREIV DGKAGKYVWQ TYKEVHNVVI KLGNSIRTIG
101: VGKGDKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA GAIEFIICHA EVSLAFAEEN KISELLKTAP KSTKYLKYIV SFGEVTNNQR VEAERHRLTI
201: YSWDQFLKLG EGKHYELPEK RRSDVCTIMY TSGTTGDPKG VLLTNESIIH LLEGVKKLLK TIDEELTSKD VYLSYLPLAH IFDRVIEELC IYEAASIGFW
301: RGDVKILIED IAALKPTVFC AVPRVLERIY TGLQQKLSDG GFVKKKLFNF AFKYKHKNME KGQPHEQASP IADKIVFKKV KEGLGGNVRL ILSGAAPLAA
401: HIESFLRVVA CAHVLQGYGL TESCGGTFVS IPNELSMLGT VGPPVPNVDI RLESVPEMGY DALASNPRGE ICIRGKTLFS GYYKREDLTQ EVFIDGWLHT
501: GDVGEWQPDG AMKIIDRKKN IFKLSQGEYV AVENLENIYS HVAAIESIWV YGNSYESYLV AVVCPSKIQI EHWAKEHKVS GDFESICRNQ KTKEFVLGEF
601: NRVAKDKKLK GFELIKGVHL DTVPFDMERD LITPSYKMKR PQLLKYYQKE IDEMYKKNRE VQLRV

Arabidopsis Description

LACS3Long chain acyl-CoA synthetase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7W4]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.