Factsheet for Os06t0158000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU75859	Sorghum	peroxisome	84.06	79.66
TraesCS7B01G012700.1	Wheat	peroxisome	82.11	77.69
TraesCS7D01G110700.1	Wheat	peroxisome	81.95	77.54
KXG19348	Sorghum	peroxisome	81.79	77.5
TraesCS7A01G115900.1	Wheat	peroxisome	78.7	76.7
Zm00001d045295_P001	Maize	extracellular	82.76	75.41
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	81.63	70.31
VIT_02s0025g01410.t01	Wine grape	peroxisome	68.29	63.44
Os01t0681200-01	Rice	plasma membrane	66.83	61.8
KRH27846	Soybean	peroxisome	66.02	61.24
KRH77642	Soybean	endoplasmic reticulum	66.67	61.1
Bra013735.1-P	Field mustard	peroxisome	61.46	60.67
PGSC0003DMT400000613	Potato	peroxisome	63.58	59.6
CDY47618	Canola	peroxisome	64.23	59.22
CDY03515	Canola	peroxisome	64.06	59.07
Solyc01g095750.2.1	Tomato	peroxisome	63.41	59.0
KRH60037	Soybean	peroxisome	63.74	58.95
Bra033159.1-P	Field mustard	peroxisome	57.89	58.94
AT4G23850.1	Thale cress	peroxisome	63.58	58.71
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	62.93	58.2
CDX86825	Canola	peroxisome	62.76	57.96
Bra035259.1-P	Field mustard	peroxisome	62.76	57.96
Os01t0655800-01	Rice	plasma membrane	63.74	57.65
CDX94232	Canola	peroxisome	61.3	57.03
AT4G11030.1	Thale cress	peroxisome	61.63	56.91
CDY25270	Canola	peroxisome	60.81	56.75
KRG94065	Soybean	vacuole	16.1	54.1
CDY40856	Canola	peroxisome	62.28	52.25
Os11t0558300-01	Rice	peroxisome	54.96	51.13
CDY46530	Canola	peroxisome	63.58	49.75
Bra027700.1-P	Field mustard	peroxisome	64.06	47.7
Os05t0132100-02	Rice	plasma membrane	48.13	44.25
KRH41306	Soybean	peroxisome	18.21	43.75
CDY64879	Canola	peroxisome	64.06	41.04
Os11t0169800-01	Rice	plastid	22.6	38.29
Os11t0147000-01	Rice	peroxisome	40.16	34.84
Os12t0143900-01	Rice	peroxisome	39.67	34.51
Os12t0168700-01	Rice	vacuole	32.36	28.51
Os05t0317200-01	Rice	plastid	33.01	27.96
Os03t0845500-01	Rice	plastid	23.09	18.93

Protein Annotations

EnsemblPlants:Os06t0158000-01	EnsemblPlantsGene:Os06g0158000	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF18	PFAM:PF00501	ProteinID:BAD69196.1
ProteinID:BAD69434.1	ProteinID:BAF18776.1	ProteinID:BAS96255.1	ProteinID:BAX24593.1	SEG:seg	SUPFAM:SSF56801
UniParc:UPI00004580A2	UniProt:Q5VM91	MapMan:50.6.2	:	:	:

Description

Similar to Acyl-CoA synthetase (EC 6.2.1.3). (Os06t0158000-01)

Coordinates

chr6:+:2949764..2957842

Molecular Weight (calculated)

68532.7 Da

IEP (calculated)

6.358

GRAVY (calculated)

-0.103

Length

615 amino acids

Sequence
(BLAST)

001: MMKHLVESEK AAENAGPTYR NVLAKDAGLL RPPPGVESCW DVFRNSVEKY PDSPMLGRRR VVDDGKAGEY VWMTYKEVYD VVMKLAASIS KSGISKGESC
101: GIYGANCPEW IISMEACNAL GVSCVPLYDS LGAGAVEFIV CHAEIQIAFV EERKIAELLK TCHATSKYLK TIISFGGVTN DQKEEAKNHG MSIFSWEEFL
201: IMGGDHHFDL PDCVTRSIGE PFDHDDVYIS YLPLAHIFDR IFEELFISHG SKIGFWRGDV KLLVDDIAAL KPTVFCAVPR VLDRIYSGLT GKISSGGILK
301: KALFNIAYKL KLDSMRKGIK HEKAAPFFDK LVFSKVKERL GGKLRFIVSG GAPLSVAVEE FLRVVTCASV VQGYGLTETG AASFVAIPND FSMVGTVGPP
401: VEHLDARLES VPEMGYDALS SIPRGEVCVK GSVLFSGYYK REDLTQEVMI DGWFHTGDVG EWQPNGSLKI IDRKKNIFKL SQGEYVAVEN LENVYGVLQE
501: IDSIWIYGNS FESFLVAVIN PNQQVLEHWA EQNGISGSLS ELCENSRAKE YILSELTKIA KEKKLKGYEF IRAVHLDPLP FDMERDLITP TYKKKRPQLL
601: KHYQGTIDAL YKMAK

Best Arabidopsis Sequence Match ( AT4G23850.1 )
(BLAST)

001: MSQQKKYIFQ VEEGKEGSDG RPSVGPVYRS IFAKDGFPDP IEGMDSCWDV FRMSVEKYPN NPMLGRREIV DGKPGKYVWQ TYQEVYDIVM KLGNSLRSVG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG

Arabidopsis Description

LACS4Long chain acyl-CoA synthetase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.