CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86825	Canola	peroxisome	90.04	99.1
AT4G11030.1	Thale cress	peroxisome	81.72	89.94
CDY25270	Canola	peroxisome	80.22	89.23
CDX94232	Canola	peroxisome	80.08	88.8
CDY47618	Canola	peroxisome	73.12	80.36
CDY03515	Canola	peroxisome	72.99	80.21
VIT_02s0025g01410.t01	Wine grape	peroxisome	67.12	74.32
Solyc08g082280.2.1	Tomato	nucleus, plastid	65.89	73.4
KRH27846	Soybean	peroxisome	65.48	72.4
Solyc08g008310.2.1	Tomato	peroxisome	58.94	72.36
KRH77642	Soybean	endoplasmic reticulum	65.62	71.68
GSMUA_Achr3P32060_001	Banana	peroxisome	62.89	70.38
GSMUA_Achr6P14370_001	Banana	peroxisome	62.48	69.92
Zm00001d044016_P001	Maize	mitochondrion	62.48	69.92
KRH60037	Soybean	peroxisome	63.03	69.47
HORVU3Hr1G059140.1	Barley	peroxisome	62.21	69.3
TraesCS3D01G237900.1	Wheat	peroxisome	62.21	69.3
TraesCS3B01G266100.1	Wheat	golgi	62.21	69.3
PGSC0003DMT400014954	Potato	cytosol	10.91	68.97
Os01t0681200-01	Rice	plasma membrane	62.48	68.87
TraesCS5B01G147300.1	Wheat	peroxisome	61.94	68.58
KXG27302	Sorghum	cytosol	5.05	68.52
TraesCS5A01G148700.1	Wheat	peroxisome	61.94	68.07
TraesCS5D01G144200.2	Wheat	peroxisome	61.8	67.92
Zm00001d043851_P001	Maize	mitochondrion	61.12	67.47
TraesCS3A01G237700.3	Wheat	peroxisome	61.53	67.21
HORVU5Hr1G046950.26	Barley	peroxisome	61.94	66.67
Zm00001d045295_P001	Maize	extracellular	58.39	63.41
TraesCS7D01G110700.1	Wheat	peroxisome	56.21	63.38
Os01t0655800-01	Rice	plasma membrane	58.8	63.38
KRH41306	Soybean	peroxisome	22.1	63.28
TraesCS7B01G012700.1	Wheat	peroxisome	55.93	63.08
TraesCS7A01G115900.1	Wheat	peroxisome	53.62	62.28
Os06t0158000-01	Rice	plasma membrane	52.25	62.28
CDY46530	Canola	peroxisome	64.26	59.92
KRG94065	Soybean	vacuole	14.46	57.92
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	55.25	56.72
CDY68722	Canola	peroxisome	21.69	55.99
CDX80092	Canola	mitochondrion, peroxisome	21.83	54.61
CDY59237	Canola	peroxisome	48.43	53.3
CDY29350	Canola	peroxisome	48.02	52.85
CDY64879	Canola	peroxisome	64.67	49.38
CDY69216	Canola	peroxisome	27.56	49.03
CDY51419	Canola	peroxisome	44.07	48.94
CDY27501	Canola	peroxisome	43.93	48.79
CDY72011	Canola	peroxisome	13.78	47.87
CDX80093	Canola	peroxisome	27.69	47.1
CDY37793	Canola	peroxisome	27.69	47.1
CDY71490	Canola	extracellular, peroxisome	9.69	46.1
CDX95713	Canola	peroxisome	40.11	42.92
CDX92843	Canola	peroxisome	11.32	38.78
CDX86151	Canola	peroxisome	34.79	36.48
CDY05217	Canola	plastid	34.11	36.39
CDX80638	Canola	peroxisome	34.65	36.34
CDY27725	Canola	plastid	33.97	36.24
CDX74115	Canola	plastid	34.11	35.92
CDY49993	Canola	mitochondrion	33.97	35.78
CDX68052	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	28.38	30.01
CDX79212	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	28.24	29.87
CDY15082	Canola	peroxisome	28.92	29.61
CDY66248	Canola	peroxisome	29.06	29.54
CDY65251	Canola	peroxisome	9.14	28.63
CDY67321	Canola	plastid	20.46	20.89
CDY12731	Canola	plastid	19.78	20.0
CDY53212	Canola	plastid	20.33	19.92
CDY01190	Canola	plastid	19.37	19.75

Protein Annotations

EnsemblPlants:CDY40856	EnsemblPlantsGene:GSBRNA2T00071856001	Gene3D:3.40.50.12780	GO:A0A078HSY9	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9
PFAM:PF00501	ProteinID:CDY40856	ProteinID:CDY40856.1	ScanProsite:PS00455	SUPFAM:SSF56801	UniParc:UPI0004EDB185
UniProt:A0A078HSY9	MapMan:50.6.2	:	:	:	:

Description

BnaC09g26090DBnaC09g26090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSY9]

Coordinates

chrLK032482:-:131757..136320

Molecular Weight (calculated)

81510.9 Da

IEP (calculated)

6.298

GRAVY (calculated)

-0.187

Length

733 amino acids

Sequence
(BLAST)

001: MTSQKRFIIE VEAAKEATDG KPSIGPVYRS TFAKDGFPNP IDGIDSCWDI FRTAVEKYPN NRMLGRREIV NNKAGKYEWK TYKEVYDIVL KLGNSLRSCG
101: IEEGGKCGIY GANCPEWIIS MEACNAHGLY CVPFYDTLGS GAVEFIISHA EVSIAFVEEK KIPELFKTCP NSTKYMKTVV SFGGVKSEQK EEAEKLGLVI
201: HAWDEFLKLG EGKQYDLPVK KKSDICTIMY TSGTTGDPKG VLMSNESIVT ITAGVRHFLA IFNESLTEKD VYISYLPLAH VFDRAVEECI IQVGGSIGFW
301: RGDVKLLIED LGELKPSIFC AVPRVLERVY TGLQQKLSVG GFFKKKVFNV AFSYKFGNMK KGQSHVEAAP FCDKLVFNKV KQGLGGNVRI ILSGAAPLAS
401: HIESFLRVVA CCHVLQGYGL TESCAGTFVT FPDELDMLGT VGPPVPNVDI RLESVPDMEY DALGSIPRGE ICIRGKTLFS GYHKREDLTK EVLIDGWFHT
501: GDIGEWQPDG SMKIIDRKKN IFKLAQGEYV AVENLENVYG QVEAIDSIWV YGNSFESFLI AVANPSQQTL ERWAAENGVN GDFDSICQNT KARAFLLGEL
601: VKTAKERKLK GFEIIRAVHL EPVAFDIERD LLTPTYKKKR PQLLKYYQNV IDDMYKTAKE GQASMQEINL PLKVFAAGEE PTGERISHHD NALDEAHASG
701: GVDQCKAITP CVLAEAAKQL AFNFYDTFSK KQS

Best Arabidopsis Sequence Match ( AT4G11030.1 )
(BLAST)

001: MTSQKRFIFE VEAAKEATDG NPSVGPVYRS TFAQNGFPNP IDGIQSCWDI FRTAVEKYPN NRMLGRREIS NGKAGKYVWK TYKEVYDIVI KLGNSLRSCG
101: IKEGEKCGIY GINCCEWIIS MEACNAHGLY CVPLYDTLGA GAVEFIISHA EVSIAFVEEK KIPELFKTCP NSTKYMKTVV SFGGVKPEQK EEAEKLGLVI
201: HSWDEFLKLG EGKQYELPIK KPSDICTIMY TSGTTGDPKG VMISNESIVT ITTGVMHFLG NVNASLSEKD VYISYLPLAH VFDRAIEECI IQVGGSIGFW
301: RGDVKLLIED LGELKPSIFC AVPRVLDRVY TGLQQKLSGG GFFKKKVFDV AFSYKFGNMK KGQSHVAASP FCDKLVFNKV KQGLGGNVRI ILSGAAPLAS
401: HIESFLRVVA CCNVLQGYGL TESCAGTFAT FPDELDMLGT VGPPVPNVDI RLESVPEMNY DALGSTPRGE ICIRGKTLFS GYYKREDLTK EVFIDGWLHT
501: GDVGEWQPNG SMKIIDRKKN IFKLAQGEYV AVENLENVYS QVEVIESIWV YGNSFESFLV AIANPAQQTL ERWAVENGVN GDFNSICQNA KAKAFILGEL
601: VKTAKENKLK GFEIIKDVHL EPVAFDMERD LLTPTYKKKR PQLLKYYQNV IHEMYKTTKE SLASGQ

Arabidopsis Description

LACS5Long chain acyl-CoA synthetase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9T009]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.