CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94065	Soybean	vacuole	24.22	33.88
KRH60037	Soybean	peroxisome	80.47	30.98
KRH77642	Soybean	endoplasmic reticulum	72.66	27.72
KRH27846	Soybean	peroxisome	69.92	27.0
Solyc08g082280.2.1	Tomato	nucleus, plastid	68.36	26.6
VIT_02s0025g01410.t01	Wine grape	peroxisome	66.41	25.68
PGSC0003DMT400014954	Potato	cytosol	11.33	25.0
CDY03515	Canola	peroxisome	63.67	24.44
CDY47618	Canola	peroxisome	63.67	24.44
Bra035259.1-P	Field mustard	peroxisome	63.28	24.32
CDX86825	Canola	peroxisome	63.28	24.32
AT4G23850.1	Thale cress	peroxisome	63.28	24.32
GSMUA_Achr3P32060_001	Banana	peroxisome	62.11	24.27
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	62.11	23.91
Zm00001d044016_P001	Maize	mitochondrion	60.94	23.82
GSMUA_Achr6P14370_001	Banana	peroxisome	60.55	23.66
HORVU3Hr1G059140.1	Barley	peroxisome	60.55	23.56
TraesCS3B01G266100.1	Wheat	golgi	60.16	23.4
TraesCS3D01G237900.1	Wheat	peroxisome	60.16	23.4
AT4G11030.1	Thale cress	peroxisome	60.55	23.27
Zm00001d043851_P001	Maize	mitochondrion	59.77	23.04
TraesCS3A01G237700.3	Wheat	peroxisome	60.16	22.95
Os01t0681200-01	Rice	plasma membrane	59.38	22.86
Bra013735.1-P	Field mustard	peroxisome	55.47	22.79
Solyc08g008310.2.1	Tomato	peroxisome	53.12	22.78
Bra033159.1-P	Field mustard	peroxisome	52.73	22.35
CDY40856	Canola	peroxisome	63.28	22.1
TraesCS5D01G144200.2	Wheat	peroxisome	57.03	21.89
TraesCS5B01G147300.1	Wheat	peroxisome	56.25	21.75
TraesCS5A01G148700.1	Wheat	peroxisome	56.25	21.59
HORVU5Hr1G046950.26	Barley	peroxisome	57.42	21.59
TraesCS7D01G110700.1	Wheat	peroxisome	54.69	21.54
CDY25270	Canola	peroxisome	55.08	21.4
CDX94232	Canola	peroxisome	55.08	21.33
TraesCS7B01G012700.1	Wheat	peroxisome	53.91	21.23
Os01t0655800-01	Rice	plasma membrane	54.3	20.44
CDY46530	Canola	peroxisome	62.5	20.36
Zm00001d045295_P001	Maize	extracellular	53.12	20.15
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	55.08	19.75
TraesCS7A01G115900.1	Wheat	peroxisome	48.44	19.65
Bra027700.1-P	Field mustard	peroxisome	62.89	19.49
KRG89197	Soybean	peroxisome	50.0	19.39
KRH49531	Soybean	peroxisome	49.61	19.24
KRH24533	Soybean	peroxisome	48.83	19.05
KRH29538	Soybean	peroxisome	48.44	18.9
Os06t0158000-01	Rice	plasma membrane	43.75	18.21
CDY64879	Canola	peroxisome	62.89	16.77
KRH69184	Soybean	peroxisome	42.19	16.36
KRH66241	Soybean	peroxisome	22.27	16.19
KRH31765	Soybean	peroxisome	41.41	16.06
KRH68292	Soybean	endoplasmic reticulum	41.02	15.86
KRG96554	Soybean	peroxisome	41.02	15.86
KRG91264	Soybean	peroxisome	31.64	11.6
KRH35544	Soybean	endoplasmic reticulum, mitochondrion	31.25	11.49
KRG89997	Soybean	endoplasmic reticulum	28.52	10.83
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	28.91	10.21
KRH17725	Soybean	peroxisome	28.91	10.21
KRH18736	Soybean	peroxisome, plastid	25.39	9.34
KRH53234	Soybean	mitochondrion	25.0	9.22
KRH13185	Soybean	cytosol	21.88	8.96
KRH16338	Soybean	plastid, vacuole	18.75	7.42
KRH31560	Soybean	plastid	19.53	6.94
KRH58837	Soybean	plastid	19.53	6.82
KXG27302	Sorghum	cytosol	1.17	5.56
KRH48841	Soybean	peroxisome	2.34	2.74
KRH57847	Soybean	cytosol	0.78	2.27
KRH26020	Soybean	cytosol	0.39	1.12

Protein Annotations

EMBL:ACUP02004759	EnsemblPlants:KRH41306	EnsemblPlantsGene:GLYMA_08G022400	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9
PFAM:PF00501	ProteinID:KRH41306	ProteinID:KRH41306.1	ScanProsite:PS00455	SUPFAM:SSF56801	UniParc:UPI0006EDE368
UniProt:A0A0R0IFR2	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:1803996..1808908

Molecular Weight (calculated)

28495.6 Da

IEP (calculated)

7.931

GRAVY (calculated)

-0.144

Length

256 amino acids

Sequence
(BLAST)

001: MAEKRFIVEV EKATEAREGK PPIGPVYRSI FAHDPLPPPI QGFFSIPTQN VSYGVKCGIY GANCPEWIMN MEACNAQGLY RVPLYDTLEV SMAFAEEKKI
101: PKLLKTFPNA GKYLKTLVSF GKVTPEQKQE VENFLCLEQG HNQSFDLPVK KKSDVCTIMY TSGTTGDPKG VLITNESIIT LLAGIQQLLK SCNEKLNEKD
201: VYLSYLPLAH IFARVIEEAM IMHGASIGFW SGDVSVTGRY WRAKANHFCC GSPCAR

Best Arabidopsis Sequence Match ( AT1G49430.1 )
(BLAST)

001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA

Arabidopsis Description

LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.