CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57847	Soybean	cytosol	36.99	92.05
KRH26020	Soybean	cytosol	36.53	89.89
KRG89197	Soybean	peroxisome	96.35	31.97
KRH49531	Soybean	peroxisome	92.24	30.61
KRH24533	Soybean	peroxisome	85.39	28.51
KRH29538	Soybean	peroxisome	84.47	28.2
VIT_03s0063g01880.t01	Wine grape	peroxisome	80.37	26.71
PGSC0003DMT400064817	Potato	peroxisome	79.45	26.4
Solyc01g109180.2.1	Tomato	nucleus	79.45	26.4
AT1G49430.1	Thale cress	peroxisome	74.89	24.66
Os11t0558300-01	Rice	peroxisome	74.43	24.66
Bra032284.1-P	Field mustard	peroxisome	73.97	24.32
CDY29350	Canola	peroxisome	73.97	24.32
CDY59237	Canola	peroxisome	73.52	24.17
KXG28707	Sorghum	peroxisome	73.06	24.06
GSMUA_Achr7P27390_001	Banana	peroxisome	71.23	23.78
TraesCS5B01G415100.1	Wheat	peroxisome	71.23	23.57
TraesCS5D01G420300.1	Wheat	golgi	71.23	23.57
TraesCS5A01G411500.2	Wheat	golgi	71.23	23.49
Zm00001d053127_P005	Maize	mitochondrion	71.23	23.49
HORVU5Hr1G099350.15	Barley	peroxisome	70.78	23.2
KRH66241	Soybean	peroxisome	33.79	21.02
KRH27846	Soybean	peroxisome	60.73	20.06
KRH60037	Soybean	peroxisome	60.27	19.85
KRH77642	Soybean	endoplasmic reticulum	59.36	19.37
KRH69184	Soybean	peroxisome	52.51	17.42
KRH31765	Soybean	peroxisome	51.6	17.12
KRG96554	Soybean	peroxisome	51.6	17.07
KRH68292	Soybean	endoplasmic reticulum	50.68	16.77
KRH35544	Soybean	endoplasmic reticulum, mitochondrion	47.49	14.94
KRG91264	Soybean	peroxisome	47.49	14.9
KRG89997	Soybean	endoplasmic reticulum	32.88	10.68
KRH18736	Soybean	peroxisome, plastid	33.79	10.63
KRH17725	Soybean	peroxisome	34.25	10.34
KRH53234	Soybean	mitochondrion	32.42	10.23
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	33.79	10.21
KRH16338	Soybean	plastid, vacuole	29.68	10.05
KRH31560	Soybean	plastid	27.4	8.33
KRH58837	Soybean	plastid	25.57	7.64
KRH13185	Soybean	cytosol	15.53	5.44
KRG94065	Soybean	vacuole	4.11	4.92
KRH41306	Soybean	peroxisome	2.74	2.34

Protein Annotations

EMBL:ACUP02004295	EnsemblPlants:KRH48841	EnsemblPlantsGene:GLYMA_07G116200	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF4
PFAM:PF00501	PFAM:PF13193	ProteinID:KRH48841	ProteinID:KRH48841.1	SUPFAM:SSF56801	UniParc:UPI0006ED863C
UniProt:A0A0R0J8J4	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:12648637..12649855

Molecular Weight (calculated)

25559.8 Da

IEP (calculated)

6.883

GRAVY (calculated)

-0.512

Length

219 amino acids

Sequence
(BLAST)

001: MTTIEARLES VPEMGYDALS NVPRGEICLR GNTLFFGYHK REDLTKEVMV DGWFHTGDIG EWQSNRAMKI IDRKKNLFKL SQGEYIAVEN IENKYLQCPL
101: IASIWVYGNN FESFLVAVVV PERKAIEDWA KEHNLTDDFK SLCNNLKARK HILDELNNTG QKHQLRGFEL LKAIHLEPNP FDIEKDLITP TFKLKRPQLL
201: KYYKDHIDQL YKEAKGEMV

Best Arabidopsis Sequence Match ( AT1G49430.1 )
(BLAST)

001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA

Arabidopsis Description

LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.