CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31765	Soybean	peroxisome	97.58	97.58
KRH66241	Soybean	peroxisome	45.0	84.38
KRG96554	Soybean	peroxisome	82.88	82.63
KRH68292	Soybean	endoplasmic reticulum	82.73	82.48
VIT_07s0005g01790.t01	Wine grape	peroxisome	75.61	75.38
PGSC0003DMT400023374	Potato	peroxisome	70.15	70.05
AT2G47240.2	Thale cress	peroxisome	68.33	68.33
CDY69216	Canola	peroxisome	42.12	67.48
CDY68722	Canola	peroxisome	28.94	67.25
CDX80092	Canola	mitochondrion, peroxisome	29.7	66.89
CDY51419	Canola	peroxisome	66.82	66.82
Bra021392.1-P	Field mustard	peroxisome	66.82	66.82
CDY27501	Canola	peroxisome	66.36	66.36
CDY72011	Canola	peroxisome	21.06	65.88
CDY37793	Canola	peroxisome	42.42	64.97
CDX80093	Canola	peroxisome	42.42	64.97
GSMUA_Achr8P10780_001	Banana	peroxisome	65.15	64.76
Os05t0132100-02	Rice	plasma membrane	64.55	63.68
Bra004467.1-P	Field mustard	peroxisome	66.97	63.41
Zm00001d024723_P001	Maize	peroxisome	64.24	63.28
TraesCS1B01G093600.1	Wheat	peroxisome	64.09	63.13
KXG21217	Sorghum	peroxisome	63.79	62.84
TraesCS1A01G075000.1	Wheat	golgi	63.64	62.69
TraesCS1D01G077600.1	Wheat	golgi	63.48	62.54
CDY71490	Canola	extracellular, peroxisome	14.09	60.39
CDX95713	Canola	peroxisome	59.7	57.52
Zm00001d010943_P001	Maize	peroxisome	11.67	54.61
HORVU1Hr1G016200.16	Barley	peroxisome	63.48	53.72
KRH48841	Soybean	peroxisome	17.42	52.51
KRH60037	Soybean	peroxisome	51.67	51.28
KRH27846	Soybean	peroxisome	50.76	50.53
KRG89197	Soybean	peroxisome	49.85	49.85
KRH49531	Soybean	peroxisome	49.55	49.55
KRH77642	Soybean	endoplasmic reticulum	50.3	49.48
KRH29538	Soybean	peroxisome	48.03	48.32
KRH24533	Soybean	peroxisome	47.88	48.17
KRH41306	Soybean	peroxisome	16.36	42.19
KRH57847	Soybean	cytosol	5.61	42.05
KRH26020	Soybean	cytosol	5.61	41.57
KRG94065	Soybean	vacuole	11.36	40.98
KRH35544	Soybean	endoplasmic reticulum, mitochondrion	37.73	35.78
KRG91264	Soybean	peroxisome	37.73	35.67
KRH18736	Soybean	peroxisome, plastid	32.73	31.03
KRH53234	Soybean	mitochondrion	32.27	30.69
KRG89997	Soybean	endoplasmic reticulum	30.61	29.97
KRH16338	Soybean	plastid, vacuole	28.64	29.21
KRH17725	Soybean	peroxisome	31.97	29.1
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	31.52	28.69
KRH13185	Soybean	cytosol	21.67	22.88
KRH31560	Soybean	plastid	24.55	22.5
KRH58837	Soybean	plastid	24.85	22.37

Protein Annotations

EntrezGene:100816578	Gene3D:3.40.50.12780	MapMan:50.6.2	EMBL:ACUP02000689	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
EnsemblPlantsGene:GLYMA_02G010300	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	UniProt:K7K5V4
EnsemblPlants:KRH69184	ProteinID:KRH69184	ProteinID:KRH69184.1	ProteinID:KRH69185.1	ProteinID:KRH69186.1	ProteinID:KRH69187.1
ProteinID:KRH69188.1	PFAM:PF00501	ScanProsite:PS00455	PANTHER:PTHR43272	PANTHER:PTHR43272:SF6	SUPFAM:SSF56801
UniParc:UPI0002337650	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:986605..994410

Molecular Weight (calculated)

74386.2 Da

IEP (calculated)

6.961

GRAVY (calculated)

-0.215

Length

660 amino acids

Sequence
(BLAST)

001: MKAFSVKVEE GREGKNGNLS VGPVYRNLLS ENEFPPMDPD FSTTWDIFCV SVKNHPNNRM LGKRKIVDEK IGPYVWKTYK EVYDEVLHMS SALRASGAEP
101: GTKIGIYGSN CPEWIVAMEA CSAQSFVCVP LYDTLGPGAV NFIIDHAEVD FVFVQDKKVK ELLNPECKSS KRLKAMVCFT SLTEEEKAKA TAIGIKPYSW
201: HDFLHLGKEN PKSTFPPQAH DICTIMYTSG TSGDPKGVVL TNENVTALVR GMDLFMEQFE DKMTVDDVYL SFLPLAHILD RTIEEYFFRK GASVGYYHGD
301: LNALRDDLME LKPTLFAGVP RVFEKVYEGI KKAVEELNPV RRTVFGMLYN YKLGWMKKGY KHRQASRLAD LLAFRKVKAR LGGRVRLIIS GGAALSPEVE
401: EFLRVTTCAF VCQGYGLTET CGPTTLGFPD EMCMLGTVGA VSIYNEIMLE EVPEMGYNPL ETPPCGEICV RGKTVFTGYY KNPELTKEAI KDGWFHTGDI
501: GEMLPNGVIK IIDRKKNLVK LSQGEYIALE HLENVYGVTP IVEDIWVYGN SFKSMLVAVV VPNEEVANKW AYSNGHIASF PILCSLDQLK KYVLSELKLT
601: AERNKLRGFE HIKGVILEPQ EFDMERDLVT ATLKKKRNKL LKYYQVEIDE LYQSLKGKKA

Best Arabidopsis Sequence Match ( AT2G47240.3 )
(BLAST)

001: MKSFAAKVEE GVKGIDGKPS VGPVYRNLLS EKGFPPIDSE ITTAWDIFSK SVEKFPDNNM LGWRRIVDEK VGPYMWKTYK EVYEEVLQIG SALRAAGAEP
101: GSRVGIYGVN CPQWIIAMEA CAAHTLICVP LYDTLGSGAV DYIVEHAEID FVFVQDTKIK GLLEPDCKCA KRLKAIVSFT NVSDELSHKA SEIGVKTYSW
201: IDFLHMGREK PEDTNPPKAF NICTIMYTSG TSGDPKGVVL THQAVATFVV GMDLYMDQFE DKMTHDDVYL SFLPLAHILD RMNEEYFFRK GASVGYYHGN
301: LNVLRDDIQE LKPTYLAGVP RVFERIHEGI QKALQELNPR RRFIFNALYK HKLAWLNRGY SHSKASPMAD FIAFRKIRDK LGGRIRLLVS GGAPLSPEIE
401: EFLRVTCCCF VVQGYGLTET LGGTALGFPD EMCMLGTVGI PAVYNEIRLE EVSEMGYDPL GENPAGEICI RGQCMFSGYY KNPELTEEVM KDGWFHTGDI
501: GEILPNGVLK IIDRKKNLIK LSQGEYVALE HLENIFGQNS VVQDIWVYGD SFKSMLVAVV VPNPETVNRW AKDLGFTKPF EELCSFPELK EHIISELKST
601: AEKNKLRKFE YIKAVTVETK PFDVERDLVT ATLKNRRNNL LKYYQVQIDE MYRKLASKKI

Arabidopsis Description

LACS1Long chain acyl-CoA synthetase 1 [Source:UniProtKB/Swiss-Prot;Acc:O22898]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.