CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71490	Canola	extracellular, peroxisome	67.3	92.21
Bra004467.1-P	Field mustard	peroxisome	98.58	29.84
AT2G47240.2	Thale cress	peroxisome	88.63	28.33
CDY51419	Canola	peroxisome	88.63	28.33
CDY27501	Canola	peroxisome	86.73	27.73
CDX95713	Canola	peroxisome	81.04	24.96
KRH68292	Soybean	endoplasmic reticulum	67.3	21.45
KRG96554	Soybean	peroxisome	66.82	21.3
VIT_07s0005g01790.t01	Wine grape	peroxisome	66.35	21.15
KRH69184	Soybean	peroxisome	65.88	21.06
KRH31765	Soybean	peroxisome	64.93	20.76
PGSC0003DMT400023374	Potato	peroxisome	63.03	20.12
GSMUA_Achr8P10780_001	Banana	peroxisome	60.66	19.28
TraesCS1B01G093600.1	Wheat	peroxisome	58.77	18.51
TraesCS1A01G075000.1	Wheat	golgi	58.29	18.36
TraesCS1D01G077600.1	Wheat	golgi	58.29	18.36
KXG21217	Sorghum	peroxisome	57.35	18.06
Os05t0132100-02	Rice	plasma membrane	56.4	17.79
Zm00001d024723_P001	Maize	peroxisome	55.45	17.46
HORVU1Hr1G016200.16	Barley	peroxisome	57.82	15.64
CDX94232	Canola	peroxisome	48.34	15.43
CDY25270	Canola	peroxisome	47.39	15.17
CDX86825	Canola	peroxisome	47.87	15.17
CDY03515	Canola	peroxisome	47.87	15.14
CDY47618	Canola	peroxisome	47.87	15.14
CDY59237	Canola	peroxisome	45.02	14.26
CDY29350	Canola	peroxisome	44.55	14.11
CDY40856	Canola	peroxisome	47.87	13.78
CDY46530	Canola	peroxisome	47.87	12.85
KRH66241	Soybean	peroxisome	18.48	11.08
CDY27725	Canola	plastid	34.6	10.63
CDY64879	Canola	peroxisome	48.34	10.62
CDY49993	Canola	mitochondrion	34.6	10.49
CDX74115	Canola	plastid	34.6	10.49
CDY05217	Canola	plastid	34.12	10.48
CDX80638	Canola	peroxisome	31.75	9.59
CDX86151	Canola	peroxisome	31.75	9.59
CDX79212	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	23.7	7.22
CDX68052	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	23.22	7.07
CDY66248	Canola	peroxisome	22.75	6.66
CDY15082	Canola	peroxisome	22.27	6.56
CDY67321	Canola	plastid	16.59	4.87
CDY53212	Canola	plastid	16.59	4.68
CDY01190	Canola	plastid	14.69	4.31
CDY12731	Canola	plastid	14.69	4.28
CDY65251	Canola	peroxisome	3.79	3.42
CDX80092	Canola	mitochondrion, peroxisome	2.37	1.71
CDX80093	Canola	peroxisome	2.37	1.16
CDY37793	Canola	peroxisome	2.37	1.16
CDY69216	Canola	peroxisome	1.42	0.73
CDY68722	Canola	peroxisome	0.95	0.7
CDX92843	Canola	peroxisome	0.47	0.47
Zm00001d010943_P001	Maize	peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:CDY72011	EnsemblPlantsGene:GSBRNA2T00023112001	Gene3D:3.40.50.12780	GO:A0A078K2I4	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF6	PFAM:PF00501
ProteinID:CDY72011	ProteinID:CDY72011.1	SUPFAM:SSF56801	UniParc:UPI0004EE4CF2	UniProt:A0A078K2I4	MapMan:35.1

Description

BnaAnng39590DBnaAnng39590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K2I4]

Coordinates

chrLK048547:+:896..2136

Molecular Weight (calculated)

23216.1 Da

IEP (calculated)

6.267

GRAVY (calculated)

0.009

Length

211 amino acids

Sequence
(BLAST)

001: MKSFAAKVEE GVKGENGKPS VGPVYRNLLS EKGFPPIDSD ITTAWDIFCK SVEKFPGNKM LGWRPIVDKK VGPYVWKTYK EAYEEVLQIG SALRALGAEP
101: GCRVGIYGIN CPQWIIAMEA CAAHTLICVP LYDTLGSGAV DYIVDHAEID FVFVQDTKIK GLLEPDSICS KRLKAIVSFT NVSKEDSIKA SEIGVKTYSW
201: LDFLHMVGLS S

Best Arabidopsis Sequence Match ( AT2G47240.1 )
(BLAST)

001: MKSFAAKVEE GVKGIDGKPS VGPVYRNLLS EKGFPPIDSE ITTAWDIFSK SVEKFPDNNM LGWRRIVDEK VGPYMWKTYK EVYEEVLQIG SALRAAGAEP
101: GSRVGIYGVN CPQWIIAMEA CAAHTLICVP LYDTLGSGAV DYIVEHAEID FVFVQDTKIK GLLEPDCKCA KRLKAIVSFT NVSDELSHKA SEIGVKTYSW
201: IDFLHMGREK PEDTNPPKAF NICTIMYTSG TSGDPKGVVL THQAVATFVV GMDLYMDQFE DKMTHDDVYL SFLPLAHILD RMNEEYFFRK GASVGYYHGN
301: LNVLRDDIQE LKPTYLAGVP RVFERIHEGI QKALQELNPR RRFIFNALYK HKLAWLNRGY SHSKASPMAD FIAFRKIRDK LGGRIRLLVS GGAPLSPEIE
401: EFLRVTCCCF VVQGYGLTET LGGTALGFPD EMCMLGTVGI PAVYNEIRLE EVSEMGYDPL GENPAGEICI RGQCMFSGYY KNPELTEEVM KDGWFHTGDI
501: GEILPNGVLK IIDRKKNLIK LSQGEYVALE HLENIFGQNS VVQDIWVYGD SFKSMLVAVV VPNPETVNRW AKDLGFTKPF EELCSFPELK EHIISELKST
601: AEKNKLRKFE YIKAVTVETK PFDVERDLVT ATLKNRRNNL LKYYQVQIDE MYRKLASKKI

Arabidopsis Description

LACS1Long chain acyl-CoA synthetase 1 [Source:UniProtKB/Swiss-Prot;Acc:O22898]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.