Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • peroxisome 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92843 Canola peroxisome 55.13 60.28
CDY05217 Canola plastid 66.24 22.56
CDY27725 Canola plastid 65.38 22.27
CDX74115 Canola plastid 61.97 20.83
CDY49993 Canola mitochondrion 61.97 20.83
KRG91264 Soybean peroxisome 55.56 18.62
TraesCS5B01G131800.3 Wheat peroxisome 55.56 18.52
EES15543 Sorghum peroxisome 53.85 18.48
TraesCS5D01G141300.1 Wheat peroxisome 55.13 18.38
TraesCS5A01G133200.2 Wheat peroxisome 55.13 18.38
CDX86151 Canola peroxisome 54.7 18.31
KRH35544 Soybean endoplasmic reticulum, mitochondrion 54.27 18.25
VIT_05s0020g03080.t01 Wine grape peroxisome 54.27 18.22
CDX80638 Canola peroxisome 54.27 18.17
HORVU5Hr1G040740.17 Barley peroxisome 55.13 18.04
Os12t0143900-01 Rice peroxisome 54.27 17.96
TraesCS4A01G184900.2 Wheat peroxisome 53.42 17.96
Zm00001d023238_P002 Maize plasma membrane 52.99 17.95
TraesCS4B01G133700.3 Wheat peroxisome 52.99 17.82
TraesCS4D01G128700.3 Wheat mitochondrion 52.99 17.82
KXG27718 Sorghum peroxisome 52.56 17.65
Zm00001d052485_P001 Maize mitochondrion, peroxisome 51.71 17.39
Os11t0147000-01 Rice peroxisome 51.71 17.07
HORVU4Hr1G025820.9 Barley peroxisome, plastid 52.56 16.4
CDY69216 Canola peroxisome 26.5 15.05
CDY68722 Canola peroxisome 17.95 14.79
CDX80093 Canola peroxisome 26.5 14.39
CDY37793 Canola peroxisome 26.5 14.39
CDX80092 Canola mitochondrion, peroxisome 17.95 14.33
CDY27501 Canola peroxisome 31.62 11.21
CDY51419 Canola peroxisome 31.2 11.06
CDY25270 Canola peroxisome 30.77 10.93
CDX94232 Canola peroxisome 29.91 10.59
CDX95713 Canola peroxisome 30.77 10.51
CDY59237 Canola peroxisome 29.91 10.51
CDY29350 Canola peroxisome 29.91 10.51
KRH13185 Soybean cytosol 27.78 10.4
CDX86825 Canola peroxisome 29.06 10.21
CDY66248 Canola peroxisome 30.77 9.99
CDY15082 Canola peroxisome 30.34 9.92
CDY03515 Canola peroxisome 28.21 9.9
CDY47618 Canola peroxisome 28.21 9.9
CDX79212 Canola endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 29.06 9.81
CDX68052 Canola endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 29.06 9.81
CDY40856 Canola peroxisome 28.63 9.14
CDY46530 Canola peroxisome 30.34 9.03
CDY64879 Canola peroxisome 31.2 7.6
CDY12731 Canola plastid 20.09 6.48
CDY67321 Canola plastid 19.23 6.27
CDY01190 Canola plastid 19.23 6.26
CDY53212 Canola plastid 19.23 6.02
CDY71490 Canola extracellular, peroxisome 3.42 5.19
CDY72011 Canola peroxisome 3.42 3.79
PGSC0003DMT400063438 Potato peroxisome 0.85 2.17
GSMUA_AchrUn_... Banana peroxisome 0.43 0.79
Protein Annotations
EnsemblPlants:CDY65251EnsemblPlantsGene:GSBRNA2T00045469001Gene3D:3.40.50.12780GO:A0A078JHT2GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152InterPro:AMP-dep_Synth/LigPANTHER:PTHR43272PANTHER:PTHR43272:SF17PFAM:PF00501
ProteinID:CDY65251ProteinID:CDY65251.1SEG:segSUPFAM:SSF56801UniParc:UPI0004EE7C04UniProt:A0A078JHT2
MapMan:35.1:::::
Description
BnaC07g50530DBnaC07g50530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHT2]
Coordinates
chrLK034706:+:17172..20311
Molecular Weight (calculated)
25463.1 Da
IEP (calculated)
9.463
GRAVY (calculated)
0.035
Length
234 amino acids
Sequence
(BLAST)
001: MHETIASFQW ASGGVDFLLN LAEHEDLAAL RPTVFSSVPR LYNRIYDGIT NAVKSSGGMK ERLFNAAYNS KKQALLNGKN ASAIWDRLVF NKIKDKLGGR
101: VRFMTSGASP MSPEVMEFMK ICFGARVLEG YGMTETACVI SGMDEGDNLI GHVGSPNPAC GWKLLLLRLP LRVGPTNSVI HGFTPVGCAN HYMPSLKAGF
201: IVKVDHVVGQ IHSVQGSGLT KETTRVVIRL LIDP
Best Arabidopsis Sequence Match ( AT3G05970.1 )
(BLAST)
001: MDSSSSSSSA AARRRINAIH SHLVTSSRSS PLLRSNPTAG EFCLDNGYSV VLPEKLNTGS WNVYRSAKSP FKLVSRFPDH PDIATLHDNF EHAVHDFRDY
101: KYLGTRVRVD GTVGDYKWMT YGEAGTARTA LGSGLVHHGI PMGSSVGIYF INRPEWLIVD HACSSYSYVS VPLYDTLGPD AVKFIVNHAT VQAIFCVAET
201: LNSLLSCLSE MPSVRLVVVV GGLIESLPSL PSSSGVKVVS YSVLLNQGRS NPQRFFPPKP DDVATICYTS GTTGTPKGVV LTHANLIANV AGSSFSVKFF
301: SSDVYISYLP LAHIYERANQ ILTVYFGVAV GFYQGDNMKL LDDLAALRPT VFSSVPRLYN RIYAGIINAV KTSGGLKERL FNAAYNAKKQ ALLNGKSASP
401: IWDRLVFNKI KDRLGGRVRF MTSGASPLSP EVMEFLKVCF GGRVTEGYGM TETSCVISGM DEGDNLTGHV GSPNPACEVK LVDVPEMNYT SADQPHPRGE
501: ICVRGPIIFT GYYKDEIQTK EVIDEDGWLH TGDIGLWLPG GRLKIIDRKK NIFKLAQGEY IAPEKIENVY AKCKFVGQCF IYGDSFNSSL VAVVSVDPDV
601: LKSWAASEGI KGGDLRELCN NPRVKAAVLS DMDTVGREAQ LRGFEFAKAV TLVLEPFTLE NGLLTPTFKI KRPQAKEYFA EAITNMYKEL GASDPSANRG
701: L
Arabidopsis Description
LACS6Long chain acyl-CoA synthetase 6, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8LPS1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.