CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013210.1-P	Field mustard	peroxisome	99.45	99.45
CDY15082	Canola	peroxisome	98.34	99.02
AT2G04350.1	Thale cress	peroxisome	88.63	88.75
KRG89997	Soybean	endoplasmic reticulum	67.27	71.96
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	72.26	71.86
KRH17725	Soybean	peroxisome	71.57	71.17
VIT_12s0057g01270.t01	Wine grape	peroxisome	70.46	70.65
Solyc07g045290.2.1	Tomato	plastid	71.01	70.52
PGSC0003DMT400044860	Potato	peroxisome	71.01	70.52
PGSC0003DMT400000868	Potato	peroxisome	70.46	69.49
KXG27640	Sorghum	peroxisome	68.93	68.46
Solyc12g009040.1.1	Tomato	plastid	68.1	68.38
Os05t0317200-01	Rice	plastid	68.24	67.77
Zm00001d005019_P004	Maize	plasma membrane	67.96	67.49
Zm00001d052399_P007	Maize	peroxisome	67.55	67.08
TraesCS5B01G166400.1	Wheat	golgi	67.41	66.76
TraesCS5D01G174000.1	Wheat	peroxisome	67.27	66.62
TraesCS5A01G169600.1	Wheat	golgi	66.99	66.35
HORVU5Hr1G052100.13	Barley	peroxisome	67.41	66.12
CDX79212	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	62.69	65.22
CDX68052	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	62.55	65.08
TraesCS3B01G570800.1	Wheat	peroxisome	15.12	53.17
CDX92843	Canola	peroxisome	11.37	38.32
CDY68722	Canola	peroxisome	14.98	38.03
CDX80092	Canola	mitochondrion, peroxisome	15.26	37.54
CDY69216	Canola	peroxisome	19.69	34.47
CDY05217	Canola	plastid	31.62	33.19
CDY27725	Canola	plastid	31.62	33.19
CDY37793	Canola	peroxisome	19.83	33.18
CDX80093	Canola	peroxisome	19.83	33.18
CDY47618	Canola	peroxisome	29.68	32.08
CDX74115	Canola	plastid	30.93	32.04
CDX86825	Canola	peroxisome	29.54	31.98
CDY03515	Canola	peroxisome	29.54	31.93
CDY49993	Canola	mitochondrion	30.79	31.9
CDY59237	Canola	peroxisome	28.85	31.23
CDY29350	Canola	peroxisome	28.85	31.23
CDY51419	Canola	peroxisome	28.43	31.06
CDY65251	Canola	peroxisome	9.99	30.77
CDX80638	Canola	peroxisome	29.68	30.62
CDY25270	Canola	peroxisome	27.88	30.5
CDX86151	Canola	peroxisome	29.54	30.47
CDY27501	Canola	peroxisome	27.74	30.3
CDX94232	Canola	peroxisome	27.74	30.26
CDY40856	Canola	peroxisome	29.54	29.06
CDX95713	Canola	peroxisome	26.35	27.74
CDY46530	Canola	peroxisome	29.4	26.97
CDY72011	Canola	peroxisome	6.66	22.75
CDY71490	Canola	extracellular, peroxisome	4.85	22.73
CDY64879	Canola	peroxisome	29.68	22.29
CDY01190	Canola	plastid	21.36	21.42
CDY12731	Canola	plastid	21.5	21.38
CDY67321	Canola	plastid	21.08	21.17
CDY53212	Canola	plastid	20.94	20.19

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:50.6.2	GO:A0A078JF88	UniProt:A0A078JF88	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	EnsemblPlants:CDY66248	ProteinID:CDY66248	ProteinID:CDY66248.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00052377001
PFAM:PF00501	ScanProsite:PS00455	PANTHER:PTHR43272	PANTHER:PTHR43272:SF30	SUPFAM:SSF56801	TMHMM:TMhelix
UniParc:UPI0004EDE6CB	SEG:seg	:	:	:	:

Description

BnaA03g57930DBnaA03g57930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JF88]

Coordinates

chrLK035167:-:13370..18040

Molecular Weight (calculated)

78591.7 Da

IEP (calculated)

7.470

GRAVY (calculated)

-0.089

Length

721 amino acids

Sequence
(BLAST)

001: MEDPPMASSF LEKSKISEYG LSTIIAGGVA ALLVPVLLSV VLTGTKKGKK RGVPVKVGGE EGYAMRHARG PDLVDVPWPG ATTMAALFEQ ACKKYSSNRL
101: LGTREFIDKE IVTSSDGRKF EKLHLGEYRW QSYGEVFERV CNFASGLVGV GHNVDTRVAI FSDTRAEWFI AFQGCFRQNL TVVTIYASLG EEALIYSLNE
201: TQVSTLICDS KQLKKLSAIQ SSLKTVKNII YIEEDGVEVA SSEVNGLGDI TVSSISEVEK LGKERPVEPS FPSKNGVAVI MFTSGSTGLP KGVMITHGNL
301: IATAAGVMKV IPKLNKNDVY IAYLPLAHVF ELEAEIVVFT WGSAIGYGSA MTLTDTSNKV KKGTKGDVSV LNPTLMTAVP AILDRVRDGV LKKVEEKGGM
401: AKTLFNFAYN RRLAAVNGSW FGAWGLEKMF WDTLVFTKIR AVLGGRIRFM LVGGAPLSPD SQRFINICMG SPIGQGYGLT ETCAGATFSE WDDPTAGRVG
501: PPLPCGYIKL VSWEEGGYRV SDKPMPRGEI VVGGNSVTAG YFNNQEKTDE VYKVDENGTR WFYTGDIGRF HPDGCLEVID RKKDIVKLQH GEYVSLGKVE
601: AALGSSNYVD NIMVHADPMN SYCVALVVPS HGALEKWAEE AGVKSSDFSE LCENGEAVKE VQQSLIKAAK AAKLEKFEIP AKIKLLPEQW TPESGLVTAA
701: LKLKREQIKA KFKDELHKLY A

Best Arabidopsis Sequence Match ( AT2G04350.1 )
(BLAST)

001: MEDSGVNPMD SPSKGSDFGV YGIIGGGIVA LLVPVLLSVV LNGTKKGKKR GVPIKVGGEE GYTMRHARAP ELVDVPWEGA ATMPALFEQS CKKYSKDRLL
101: GTREFIDKEF ITASDGRKFE KLHLGEYKWQ SYGEVFERVC NFASGLVNVG HNVDDRVAIF SDTRAEWFIA FQGCFRQSIT VVTIYASLGE EALIYSLNET
201: RVSTLICDSK QLKKLSAIQS SLKTVKNIIY IEEDGVDVAS SDVNSMGDIT VSSISEVEKL GQKNAVQPIL PSKNGVAVIM FTSGSTGLPK GVMITHGNLV
301: ATAAGVMKVV PKLDKNDTYI AYLPLAHVFE LEAEIVVFTS GSAIGYGSAM TLTDTSNKVK KGTKGDVSAL KPTIMTAVPA ILDRVREGVL KKVEEKGGMA
401: KTLFDFAYKR RLAAVDGSWF GAWGLEKMLW DALVFKKIRA VLGGHIRFML VGGAPLSPDS QRFINICMGS PIGQGYGLTE TCAGATFSEW DDPAVGRVGP
501: PLPCGYVKLV SWEEGGYRIS DKPMPRGEIV VGGNSVTAGY FNNQEKTDEV YKVDEKGTRW FYTGDIGRFH PDGCLEVIDR KKDIVKLQHG EYVSLGKVEA
601: ALGSSNYVDN IMVHADPINS YCVALVVPSR GALEKWAEEA GVKHSEFAEL CEKGEAVKEV QQSLTKAGKA AKLEKFELPA KIKLLSEPWT PESGLVTAAL
701: KIKREQIKSK FKDELSKLYA

Arabidopsis Description

LACS8Long chain acyl-CoA synthetase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJD4]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.