Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G166400.1 | Wheat | golgi | 99.18 | 99.18 |
| HORVU5Hr1G052100.13 | Barley | peroxisome | 96.7 | 95.78 |
| Os05t0317200-01 | Rice | plastid | 87.77 | 88.02 |
| KXG27640 | Sorghum | peroxisome | 86.4 | 86.64 |
| Zm00001d052399_P007 | Maize | peroxisome | 84.07 | 84.3 |
| Zm00001d005019_P004 | Maize | plasma membrane | 83.52 | 83.75 |
| Solyc07g045290.2.1 | Tomato | plastid | 69.64 | 69.83 |
| PGSC0003DMT400044860 | Potato | peroxisome | 69.23 | 69.42 |
| VIT_12s0057g01270.t01 | Wine grape | peroxisome | 67.99 | 68.85 |
| PGSC0003DMT400000868 | Potato | peroxisome | 68.96 | 68.67 |
| CDY15082 | Canola | peroxisome | 66.76 | 67.88 |
| KRG89995 | Soybean | endoplasmic reticulum, mitochondrion | 67.58 | 67.86 |
| Solyc12g009040.1.1 | Tomato | plastid | 66.76 | 67.69 |
| KRG89997 | Soybean | endoplasmic reticulum | 62.64 | 67.66 |
| KRH17725 | Soybean | peroxisome | 67.03 | 67.31 |
| CDY66248 | Canola | peroxisome | 66.62 | 67.27 |
| Bra013210.1-P | Field mustard | peroxisome | 66.48 | 67.13 |
| AT2G04350.1 | Thale cress | peroxisome | 65.25 | 65.97 |
| TraesCS4D01G108300.1 | Wheat | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 61.26 | 63.99 |
| TraesCS5D01G129800.1 | Wheat | golgi | 60.16 | 62.75 |
| TraesCS3D01G237900.1 | Wheat | peroxisome | 30.49 | 33.74 |
| TraesCS5D01G420300.1 | Wheat | golgi | 29.67 | 32.63 |
| TraesCS7D01G110700.1 | Wheat | peroxisome | 29.12 | 32.62 |
| TraesCS5D01G144200.2 | Wheat | peroxisome | 29.12 | 31.78 |
| TraesCS4D01G128700.3 | Wheat | mitochondrion | 28.71 | 30.03 |
| TraesCS1D01G077600.1 | Wheat | golgi | 27.61 | 30.0 |
| TraesCS5D01G141300.1 | Wheat | peroxisome | 28.85 | 29.91 |
| TraesCS5D01G533800.3 | Wheat | mitochondrion, plastid | 21.7 | 21.38 |
| TraesCS5D01G533700.1 | Wheat | plastid | 21.02 | 20.87 |
Protein Annotations
| Gene3D:3.30.300.30 | Gene3D:3.40.50.12780 | MapMan:50.6.2 | InterPro:AMP-binding_CS | InterPro:AMP-dep_Synth/Lig | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004467 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009536 |
| GO:GO:0009941 | GO:GO:0009987 | PFAM:PF00501 | ScanProsite:PS00455 | PANTHER:PTHR43272 | PANTHER:PTHR43272:SF30 |
| SUPFAM:SSF56801 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5D01G174000 | EnsemblPlants:TraesCS5D01G174000.1 | TIGR:cd05927 | SEG:seg |
Description
No Description!
Coordinates
chr5D:-:272361086..272370618
Molecular Weight (calculated)
79878.8 Da
IEP (calculated)
8.384
GRAVY (calculated)
-0.036
Length
728 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMATITGEN PNMSILQRLT TSDLPLVKEY GLPGVIGALL LAIVIPILLS SMFSKKVKKR AVQVDVGGEA GLAMRNSRFS SLIQVPWEGA TTMAALFEMA
101: SKKYTQHRCL GTRKLISSEF IEAADGRKFE KLHLGEYQWN SYAEAFKRAC NFASGLIKMG HQLDSRAAIF SDTRAEWIIA AQGCFRQNLT VVTIYASLGE
201: DALVHSLNET QVSTLICDSK QLKKLPAVSS KLHSLKHVIY IEDEPVEADT LNQLKHLTTL SFNAVEELGK TSHADARLPT STDTAVIMYT SGSTGLPKGV
301: MITHGNMVAT IAAVRTIIPN LGTSDVYLAY LPLAHVFELA AESVMLASGV AIGYGSALTM TDASNKIKKG TKGDVSVLKP TLMISVPAIL DRIRDAVFKK
401: VAEKGGITKK LFDVAYKRNL GAIEGSWTGS WAPERFIWNS IIFKPIRAML GGHIRFILCG GAPLSSETQR FINICLGVPV GQGYGLTETC AGAAFSEWDD
501: TSVGRVGPPL PCCYVKLISW EEGGYRISDS PMPRGEVVIG GHSITKGYFN NEAKTNEVYK VDERGIRWFY TGDIGQFHPD GCVEIIDRKK DIVKLQHGEY
601: VSLGKVESAL QTSNYVDNIM VYADPFHSYC VALVVPPHQA LEKWAQNSGI SYKDIEELCH NDQAIKEVQQ SLSKAAKAAR LEKFEIPAKI ILLPEPWTPE
701: SGLVTAALKL KREQLKAKFK DDLNKLYQ
101: SKKYTQHRCL GTRKLISSEF IEAADGRKFE KLHLGEYQWN SYAEAFKRAC NFASGLIKMG HQLDSRAAIF SDTRAEWIIA AQGCFRQNLT VVTIYASLGE
201: DALVHSLNET QVSTLICDSK QLKKLPAVSS KLHSLKHVIY IEDEPVEADT LNQLKHLTTL SFNAVEELGK TSHADARLPT STDTAVIMYT SGSTGLPKGV
301: MITHGNMVAT IAAVRTIIPN LGTSDVYLAY LPLAHVFELA AESVMLASGV AIGYGSALTM TDASNKIKKG TKGDVSVLKP TLMISVPAIL DRIRDAVFKK
401: VAEKGGITKK LFDVAYKRNL GAIEGSWTGS WAPERFIWNS IIFKPIRAML GGHIRFILCG GAPLSSETQR FINICLGVPV GQGYGLTETC AGAAFSEWDD
501: TSVGRVGPPL PCCYVKLISW EEGGYRISDS PMPRGEVVIG GHSITKGYFN NEAKTNEVYK VDERGIRWFY TGDIGQFHPD GCVEIIDRKK DIVKLQHGEY
601: VSLGKVESAL QTSNYVDNIM VYADPFHSYC VALVVPPHQA LEKWAQNSGI SYKDIEELCH NDQAIKEVQQ SLSKAAKAAR LEKFEIPAKI ILLPEPWTPE
701: SGLVTAALKL KREQLKAKFK DDLNKLYQ
001: MEDSGVNPMD SPSKGSDFGV YGIIGGGIVA LLVPVLLSVV LNGTKKGKKR GVPIKVGGEE GYTMRHARAP ELVDVPWEGA ATMPALFEQS CKKYSKDRLL
101: GTREFIDKEF ITASDGRKFE KLHLGEYKWQ SYGEVFERVC NFASGLVNVG HNVDDRVAIF SDTRAEWFIA FQGCFRQSIT VVTIYASLGE EALIYSLNET
201: RVSTLICDSK QLKKLSAIQS SLKTVKNIIY IEEDGVDVAS SDVNSMGDIT VSSISEVEKL GQKNAVQPIL PSKNGVAVIM FTSGSTGLPK GVMITHGNLV
301: ATAAGVMKVV PKLDKNDTYI AYLPLAHVFE LEAEIVVFTS GSAIGYGSAM TLTDTSNKVK KGTKGDVSAL KPTIMTAVPA ILDRVREGVL KKVEEKGGMA
401: KTLFDFAYKR RLAAVDGSWF GAWGLEKMLW DALVFKKIRA VLGGHIRFML VGGAPLSPDS QRFINICMGS PIGQGYGLTE TCAGATFSEW DDPAVGRVGP
501: PLPCGYVKLV SWEEGGYRIS DKPMPRGEIV VGGNSVTAGY FNNQEKTDEV YKVDEKGTRW FYTGDIGRFH PDGCLEVIDR KKDIVKLQHG EYVSLGKVEA
601: ALGSSNYVDN IMVHADPINS YCVALVVPSR GALEKWAEEA GVKHSEFAEL CEKGEAVKEV QQSLTKAGKA AKLEKFELPA KIKLLSEPWT PESGLVTAAL
701: KIKREQIKSK FKDELSKLYA
101: GTREFIDKEF ITASDGRKFE KLHLGEYKWQ SYGEVFERVC NFASGLVNVG HNVDDRVAIF SDTRAEWFIA FQGCFRQSIT VVTIYASLGE EALIYSLNET
201: RVSTLICDSK QLKKLSAIQS SLKTVKNIIY IEEDGVDVAS SDVNSMGDIT VSSISEVEKL GQKNAVQPIL PSKNGVAVIM FTSGSTGLPK GVMITHGNLV
301: ATAAGVMKVV PKLDKNDTYI AYLPLAHVFE LEAEIVVFTS GSAIGYGSAM TLTDTSNKVK KGTKGDVSAL KPTIMTAVPA ILDRVREGVL KKVEEKGGMA
401: KTLFDFAYKR RLAAVDGSWF GAWGLEKMLW DALVFKKIRA VLGGHIRFML VGGAPLSPDS QRFINICMGS PIGQGYGLTE TCAGATFSEW DDPAVGRVGP
501: PLPCGYVKLV SWEEGGYRIS DKPMPRGEIV VGGNSVTAGY FNNQEKTDEV YKVDEKGTRW FYTGDIGRFH PDGCLEVIDR KKDIVKLQHG EYVSLGKVEA
601: ALGSSNYVDN IMVHADPINS YCVALVVPSR GALEKWAEEA GVKHSEFAEL CEKGEAVKEV QQSLTKAGKA AKLEKFELPA KIKLLSEPWT PESGLVTAAL
701: KIKREQIKSK FKDELSKLYA
Arabidopsis Description
LACS8Long chain acyl-CoA synthetase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJD4]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.