Factsheet for Zm00001d052399_P007

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG27640	Sorghum	peroxisome	95.59	95.59
Zm00001d005019_P004	Maize	plasma membrane	94.63	94.63
Os05t0317200-01	Rice	plastid	87.6	87.6
TraesCS5D01G174000.1	Wheat	peroxisome	84.3	84.07
TraesCS5B01G166400.1	Wheat	golgi	84.3	84.07
TraesCS5A01G169600.1	Wheat	golgi	84.16	83.93
HORVU5Hr1G052100.13	Barley	peroxisome	84.3	83.27
VIT_12s0057g01270.t01	Wine grape	peroxisome	68.46	69.12
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	68.18	68.28
CDY15082	Canola	peroxisome	67.08	68.02
Bra013210.1-P	Field mustard	peroxisome	67.22	67.68
CDY66248	Canola	peroxisome	67.08	67.55
KRG89997	Soybean	endoplasmic reticulum	62.67	67.51
Solyc07g045290.2.1	Tomato	plastid	67.49	67.49
KRH17725	Soybean	peroxisome	67.22	67.31
PGSC0003DMT400044860	Potato	peroxisome	67.22	67.22
PGSC0003DMT400000868	Potato	peroxisome	67.22	66.76
AT2G04350.1	Thale cress	peroxisome	65.84	66.39
Solyc12g009040.1.1	Tomato	plastid	64.6	65.32
Zm00001d023538_P002	Maize	plastid	60.47	62.89
TraesCS3B01G570800.1	Wheat	peroxisome	17.63	62.44
Zm00001d053009_P009	Maize	plastid	59.09	61.46
Zm00001d053127_P005	Maize	mitochondrion	29.75	32.53
Zm00001d044016_P001	Maize	mitochondrion	28.79	31.91
Zm00001d043851_P001	Maize	mitochondrion	28.79	31.48
Zm00001d052485_P001	Maize	mitochondrion, peroxisome	30.17	31.47
Zm00001d023238_P002	Maize	plasma membrane	29.61	31.11
Zm00001d045295_P001	Maize	extracellular	28.37	30.52
Zm00001d010943_P001	Maize	peroxisome	5.92	30.5
Zm00001d024723_P001	Maize	peroxisome	27.82	30.15
Zm00001d034832_P006	Maize	plastid	21.49	19.55

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:50.6.2	UniProt:A0A1D6QGV9	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	ProteinID:AQK57122.1	ProteinID:AQK57123.1	ProteinID:AQK57125.1	ProteinID:AQK57128.1	ProteinID:AQK57130.1
ProteinID:AQK57131.1	ProteinID:AQK57132.1	ProteinID:AQK57135.1	ProteinID:AQK57136.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	PFAM:PF00501
PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR43272	PANTHER:PTHR43272:SF30	SUPFAM:SSF56801	TMHMM:TMhelix
UniParc:UPI0008445344	EnsemblPlantsGene:Zm00001d052399	EnsemblPlants:Zm00001d052399_P007	EnsemblPlants:Zm00001d052399_T007	SEG:seg	:

Description

Long chain acyl-CoA synthetase 8

Coordinates

chr4:+:189147108..189154683

Molecular Weight (calculated)

80100.6 Da

IEP (calculated)

7.525

GRAVY (calculated)

-0.132

Length

726 amino acids

Sequence
(BLAST)

001: MGEVSDDNSN MSFLKRIATS DVPLLKEYGV NGVVVALLLA VVTPVLLSMM FGKKTKQRAV RADVGGEEGF AMRNNRFSSL VEVPWEGATT MSALFEMASK
101: KYSRQRCLGT RKLIKREFME SSDGRKFEKL HLGEYEWDTY TEAFNRACNF SSGLIKMGHD LDSHAAIFSD TRAEWIIAAQ GCFRQNLTVV TIYASLGEDA
201: LVHSLNETQV STLICDSKQL KKIPAISYKL QSLRRIIYIE DEPVEAETLN QVKHLTTLSF TEVEELGKTS HVDARLPSGS DTAVIMYTSG STGLPKGVMI
301: THGNMVATTA AVMTIVPNLG MNDVYLAYLP LAHVFELAGE TVMLASGSAI GYGSALTMTD TSNKIKKGTK GDVSVLNPTL MISVPAILDR IRDAVFKKVG
401: EKGGLTKKLF DFSYKRNIAA IEGSWFGSWA PERMLWDHII YKPIRAMLGG RLRFVLCGGA PLSSDTQRFM NICLGVPVGQ GYGLTETCAG AAFTEWDDTS
501: VGRVGPPLPC CYVKLVSWEE GGYKISDSPM PRGEVAVGGH SITKGYFNNE AKTNEVYKVD ERGIRWFYTG DIGQFHPDGC LEIIDRKKDI VKLQHGEYVS
601: LGKVESALAT SNYVENIMVY ADPFHNYCVA LVVPAHQALE KWAQNSGMNY EGFGELCQND RAIKEVQQSL SKAAKAARLE KFEVPAKIVL LPEPWTPESG
701: LVTAALKLKR EQIKAKFKGD LDKLYH

Best Arabidopsis Sequence Match ( AT1G77590.1 )
(BLAST)

001: MIPYAAGVIV PLALTFLVQK SKKEKKRGVV VDVGGEPGYA IRNHRFTEPV SSHWEHISTL PELFEISCNA HSDRVFLGTR KLISREIETS EDGKTFEKLH
101: LGDYEWLTFG KTLEAVCDFA SGLVQIGHKT EERVAIFADT REEWFISLQG CFRRNVTVVT IYSSLGEEAL CHSLNETEVT TVICGSKELK KLMDISQQLE
201: TVKRVICMDD EFPSDVNSNW MATSFTDVQK LGRENPVDPN FPLSADVAVI MYTSGSTGLP KGVMMTHGNV LATVSAVMTI VPDLGKRDIY MAYLPLAHIL
301: ELAAESVMAT IGSAIGYGSP LTLTDTSNKI KKGTKGDVTA LKPTIMTAVP AILDRVRDGV RKKVDAKGGL SKKLFDFAYA RRLSAINGSW FGAWGLEKLL
401: WDVLVFRKIR AVLGGQIRYL LSGGAPLSGD TQRFINICVG APIGQGYGLT ETCAGGTFSE FEDTSVGRVG APLPCSFVKL VDWAEGGYLT SDKPMPRGEI
501: VIGGSNITLG YFKNEEKTKE VYKVDEKGMR WFYTGDIGRF HPDGCLEIID RKKDIVKLQH GEYVSLGKVE AALSISPYVE NIMVHADSFY SYCVALVVAS
601: QHTVEGWASK QGIDFANFEE LCTKEQAVKE VYASLVKAAK QSRLEKFEIP AKIKLLASPW TPESGLVTAA LKLKRDVIRR EFSEDLTKLY A

Arabidopsis Description

LACS9Long chain acyl-CoA synthetase 9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CAP8]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.