Factsheet for TraesCS3B01G570800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, plastid, secretory
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G052100.13	Barley	peroxisome	68.78	19.18
TraesCS5B01G166400.1	Wheat	golgi	66.83	18.82
TraesCS5A01G169600.1	Wheat	golgi	65.85	18.54
Os05t0317200-01	Rice	plastid	64.88	18.32
KXG27640	Sorghum	peroxisome	64.39	18.18
Zm00001d052399_P007	Maize	peroxisome	62.44	17.63
Zm00001d005019_P004	Maize	plasma membrane	60.98	17.22
VIT_12s0057g01270.t01	Wine grape	peroxisome	55.61	15.86
PGSC0003DMT400000868	Potato	peroxisome	54.63	15.32
Solyc12g009040.1.1	Tomato	plastid	53.17	15.18
Solyc07g045290.2.1	Tomato	plastid	53.66	15.15
CDY66248	Canola	peroxisome	53.17	15.12
CDY15082	Canola	peroxisome	52.68	15.08
Bra013210.1-P	Field mustard	peroxisome	52.68	14.98
KRG89997	Soybean	endoplasmic reticulum	48.78	14.84
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	52.2	14.76
PGSC0003DMT400044860	Potato	peroxisome	52.2	14.74
AT2G04350.1	Thale cress	peroxisome	51.71	14.72
KRH17725	Soybean	peroxisome	51.71	14.62
TraesCS4B01G110600.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	48.78	14.35
TraesCS5B01G118000.1	Wheat	endoplasmic reticulum	47.8	14.04
TraesCS3B01G266100.1	Wheat	golgi	31.22	9.73
TraesCS5B01G415100.1	Wheat	peroxisome	29.76	9.21
TraesCS5B01G147300.1	Wheat	peroxisome	27.32	8.46
TraesCS1B01G093600.1	Wheat	peroxisome	27.32	8.36
TraesCS7B01G012700.1	Wheat	peroxisome	26.34	8.31
TraesCS4B01G133700.3	Wheat	peroxisome	27.32	8.05
TraesCS5B01G131800.3	Wheat	peroxisome	27.32	7.98
TraesCS5B01G536300.1	Wheat	mitochondrion, plastid	19.51	5.3
TraesCS5B01G536200.1	Wheat	plastid	18.05	5.1

Protein Annotations

EnsemblPlants:TraesCS3B01G570800.1	EnsemblPlantsGene:TraesCS3B01G570800	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF30	PFAM:PF00501	SUPFAM:SSF56801
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:802759350..802761979

Molecular Weight (calculated)

23512.3 Da

IEP (calculated)

7.876

GRAVY (calculated)

-0.361

Length

205 amino acids

Sequence
(BLAST)

001: MRPTLMSVFL EIQAYFIGKG GYRNSDSPMP RGEVIIGGYS ITNGYFNNEA KTDEVYKVDV RGICWFYTGD IGQLRPDGCI EIIDREKYIF EPALHTSNYV
101: ESIMAYADPF HTYCVALVVS PHQALKKWAQ NSGISYKDIE QLCHNDQAIK EVQQSLSKGT KAERLEKFEI PAKIVFCLNV GRVWLVTKRE KLKTKFQDDL
201: KKLDH

Best Arabidopsis Sequence Match ( AT1G77590.1 )
(BLAST)

001: MIPYAAGVIV PLALTFLVQK SKKEKKRGVV VDVGGEPGYA IRNHRFTEPV SSHWEHISTL PELFEISCNA HSDRVFLGTR KLISREIETS EDGKTFEKLH
101: LGDYEWLTFG KTLEAVCDFA SGLVQIGHKT EERVAIFADT REEWFISLQG CFRRNVTVVT IYSSLGEEAL CHSLNETEVT TVICGSKELK KLMDISQQLE
201: TVKRVICMDD EFPSDVNSNW MATSFTDVQK LGRENPVDPN FPLSADVAVI MYTSGSTGLP KGVMMTHGNV LATVSAVMTI VPDLGKRDIY MAYLPLAHIL
301: ELAAESVMAT IGSAIGYGSP LTLTDTSNKI KKGTKGDVTA LKPTIMTAVP AILDRVRDGV RKKVDAKGGL SKKLFDFAYA RRLSAINGSW FGAWGLEKLL
401: WDVLVFRKIR AVLGGQIRYL LSGGAPLSGD TQRFINICVG APIGQGYGLT ETCAGGTFSE FEDTSVGRVG APLPCSFVKL VDWAEGGYLT SDKPMPRGEI
501: VIGGSNITLG YFKNEEKTKE VYKVDEKGMR WFYTGDIGRF HPDGCLEIID RKKDIVKLQH GEYVSLGKVE AALSISPYVE NIMVHADSFY SYCVALVVAS
601: QHTVEGWASK QGIDFANFEE LCTKEQAVKE VYASLVKAAK QSRLEKFEIP AKIKLLASPW TPESGLVTAA LKLKRDVIRR EFSEDLTKLY A

Arabidopsis Description

LACS9Long chain acyl-CoA synthetase 9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CAP8]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.