CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	97.52	97.52
KRG89997	Soybean	endoplasmic reticulum	81.38	87.54
VIT_12s0057g01270.t01	Wine grape	peroxisome	73.66	74.27
CDY15082	Canola	peroxisome	70.9	71.79
Bra013210.1-P	Field mustard	peroxisome	71.31	71.71
CDY66248	Canola	peroxisome	71.17	71.57
Solyc07g045290.2.1	Tomato	plastid	70.48	70.39
PGSC0003DMT400044860	Potato	peroxisome	70.34	70.25
AT2G04350.1	Thale cress	peroxisome	69.24	69.72
PGSC0003DMT400000868	Potato	peroxisome	69.93	69.36
Os05t0317200-01	Rice	plastid	68.28	68.18
Solyc12g009040.1.1	Tomato	plastid	67.17	67.83
Zm00001d005019_P004	Maize	plasma membrane	67.86	67.77
KXG27640	Sorghum	peroxisome	67.72	67.63
Zm00001d052399_P007	Maize	peroxisome	67.31	67.22
TraesCS5B01G166400.1	Wheat	golgi	67.45	67.17
TraesCS5D01G174000.1	Wheat	peroxisome	67.31	67.03
HORVU5Hr1G052100.13	Barley	peroxisome	67.72	66.8
TraesCS5A01G169600.1	Wheat	golgi	67.03	66.76
KRH18736	Soybean	peroxisome, plastid	60.69	63.22
KRH53234	Soybean	mitochondrion	60.41	63.11
KRH16338	Soybean	plastid, vacuole	52.41	58.73
TraesCS3B01G570800.1	Wheat	peroxisome	14.62	51.71
KRH48841	Soybean	peroxisome	10.34	34.25
KRH77642	Soybean	endoplasmic reticulum	31.31	33.83
KRH27846	Soybean	peroxisome	30.62	33.48
KRH60037	Soybean	peroxisome	30.48	33.23
KRH31765	Soybean	peroxisome	29.38	32.27
KRG89197	Soybean	peroxisome	29.24	32.12
KRH69184	Soybean	peroxisome	29.1	31.97
KRH49531	Soybean	peroxisome	28.97	31.82
KRH24533	Soybean	peroxisome	28.69	31.71
KRH35544	Soybean	endoplasmic reticulum, mitochondrion	30.34	31.61
KRG91264	Soybean	peroxisome	30.34	31.52
KRH29538	Soybean	peroxisome	28.0	30.95
KRG96554	Soybean	peroxisome	28.0	30.66
KRH68292	Soybean	endoplasmic reticulum	27.45	30.06
KRH41306	Soybean	peroxisome	10.21	28.91
KRH66241	Soybean	peroxisome	13.66	28.12
KRG94065	Soybean	vacuole	6.9	27.32
KRH57847	Soybean	cytosol	2.9	23.86
KRH26020	Soybean	cytosol	2.9	23.6
KRH58837	Soybean	plastid	22.21	21.96
KRH31560	Soybean	plastid	21.66	21.81
KRH13185	Soybean	cytosol	16.83	19.52

Protein Annotations

EntrezGene:100802266	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:50.6.2	EMBL:ACUP02007832	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:GLYMA_13G010100	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	UniProt:I1LXQ1	ProteinID:KRH17724.1	EnsemblPlants:KRH17725
ProteinID:KRH17725	ProteinID:KRH17725.1	PFAM:PF00501	ScanProsite:PS00455	PANTHER:PTHR43272	PANTHER:PTHR43272:SF30
SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI000233B7D8	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:2735552..2746104

Molecular Weight (calculated)

79554.8 Da

IEP (calculated)

7.841

GRAVY (calculated)

-0.107

Length

725 amino acids

Sequence
(BLAST)

001: MDDPKGSSSW LKSLNISDIF GWKGHGEYGA LAAIVISILV PVLFSALFFG KKKGKIRGVP VEVGGEECFA VRNARKTELV EVPWKGAPTM AHLFEQSCNK
101: YTRNQFLGTR KIIQKEFVTS SDGRKFEKLH LGDYEWETYG EVFARVSNFA SGLLKLGHNG DSRVAIFSDT RAEWLIALQG CFRQNVTVVT IYASLGEDAL
201: IHSLNETEVS TLICDSKQSK KLDAIRSRLT SLQNVIYFED DNEEDAFSGS SSGWTIASFS EVEKLGKESP VEPSLPSKNA IAVIMYTSGS TGLPKGVMIT
301: HGNIVATTAA VMTVIPNLGS KDVYLAYLPL AHVFEMAAES VMLAAGCAIG YGSPLTLTDT SNKVKKGTKG DATVLKPTLL TAVPAILDRI RDGVVKKVEQ
401: KGGLVKNLFH FAYKRRLGAV KGSWLGAWGL EKLMWDTIVF KQIRTALGGQ LRFMLCGGAP LSGDSQHFIN ICMGAPIGQG YGLTETFAGA AFSEWDDYSV
501: GRVGPPLPCC HIKLVSWEEG GYLTSDKPMP RGEIVVGGFS VTAGYFKNQE KTKEVFKVDE KGMRWFYTGD IGQFHPDGCL EIIDRKKDIV KLQHGEYISL
601: GKIEAALSSC DHVDNIMVYA DPFHNYCVAL VVASHQSLEK WAQQAGIDYQ DFPDLCNKPE TVTEVLQSIS KVAKSAKLEK TEIPAKIKLL PDPWTPESGL
701: VTAALKIKRE QLKAKFKDEL QKLYA

Best Arabidopsis Sequence Match ( AT2G04350.1 )
(BLAST)

001: MEDSGVNPMD SPSKGSDFGV YGIIGGGIVA LLVPVLLSVV LNGTKKGKKR GVPIKVGGEE GYTMRHARAP ELVDVPWEGA ATMPALFEQS CKKYSKDRLL
101: GTREFIDKEF ITASDGRKFE KLHLGEYKWQ SYGEVFERVC NFASGLVNVG HNVDDRVAIF SDTRAEWFIA FQGCFRQSIT VVTIYASLGE EALIYSLNET
201: RVSTLICDSK QLKKLSAIQS SLKTVKNIIY IEEDGVDVAS SDVNSMGDIT VSSISEVEKL GQKNAVQPIL PSKNGVAVIM FTSGSTGLPK GVMITHGNLV
301: ATAAGVMKVV PKLDKNDTYI AYLPLAHVFE LEAEIVVFTS GSAIGYGSAM TLTDTSNKVK KGTKGDVSAL KPTIMTAVPA ILDRVREGVL KKVEEKGGMA
401: KTLFDFAYKR RLAAVDGSWF GAWGLEKMLW DALVFKKIRA VLGGHIRFML VGGAPLSPDS QRFINICMGS PIGQGYGLTE TCAGATFSEW DDPAVGRVGP
501: PLPCGYVKLV SWEEGGYRIS DKPMPRGEIV VGGNSVTAGY FNNQEKTDEV YKVDEKGTRW FYTGDIGRFH PDGCLEVIDR KKDIVKLQHG EYVSLGKVEA
601: ALGSSNYVDN IMVHADPINS YCVALVVPSR GALEKWAEEA GVKHSEFAEL CEKGEAVKEV QQSLTKAGKA AKLEKFELPA KIKLLSEPWT PESGLVTAAL
701: KIKREQIKSK FKDELSKLYA

Arabidopsis Description

LACS8Long chain acyl-CoA synthetase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJD4]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.