CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89197	Soybean	peroxisome	95.76	95.76
KRH48841	Soybean	peroxisome	30.61	92.24
KRH57847	Soybean	cytosol	11.97	89.77
KRH26020	Soybean	cytosol	11.82	87.64
KRH24533	Soybean	peroxisome	82.58	83.08
KRH29538	Soybean	peroxisome	81.52	82.01
VIT_03s0063g01880.t01	Wine grape	peroxisome	75.0	75.11
PGSC0003DMT400064817	Potato	peroxisome	73.79	73.9
Solyc01g109180.2.1	Tomato	nucleus	73.48	73.6
GSMUA_Achr7P27390_001	Banana	peroxisome	68.33	68.75
AT1G49430.1	Thale cress	peroxisome	67.73	67.22
CDY59237	Canola	peroxisome	67.73	67.12
Os11t0558300-01	Rice	peroxisome	67.12	67.02
Bra032284.1-P	Field mustard	peroxisome	67.58	66.97
CDY29350	Canola	peroxisome	67.58	66.97
KXG28707	Sorghum	peroxisome	66.21	65.71
TraesCS5D01G420300.1	Wheat	golgi	65.3	65.11
TraesCS5B01G415100.1	Wheat	peroxisome	65.15	64.95
TraesCS5A01G411500.2	Wheat	golgi	65.3	64.91
Zm00001d053127_P005	Maize	mitochondrion	65.0	64.61
HORVU5Hr1G099350.15	Barley	peroxisome	65.15	64.37
KRH27846	Soybean	peroxisome	55.91	55.66
KRH60037	Soybean	peroxisome	55.91	55.49
KRH77642	Soybean	endoplasmic reticulum	56.36	55.44
KRH41306	Soybean	peroxisome	19.24	49.61
KRH69184	Soybean	peroxisome	49.55	49.55
KRH31765	Soybean	peroxisome	48.79	48.79
KRG94065	Soybean	vacuole	13.18	47.54
KRG96554	Soybean	peroxisome	47.58	47.43
KRH68292	Soybean	endoplasmic reticulum	46.67	46.53
KRH66241	Soybean	peroxisome	23.33	43.75
KRH35544	Soybean	endoplasmic reticulum, mitochondrion	40.3	38.22
KRG91264	Soybean	peroxisome	40.15	37.97
KRG89997	Soybean	endoplasmic reticulum	30.91	30.27
KRH18736	Soybean	peroxisome, plastid	30.61	29.02
KRH17725	Soybean	peroxisome	31.82	28.97
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	31.82	28.97
KRH53234	Soybean	mitochondrion	30.3	28.82
KRH16338	Soybean	plastid, vacuole	27.27	27.82
KRH13185	Soybean	cytosol	21.97	23.2
KRH31560	Soybean	plastid	24.24	22.22
KRH58837	Soybean	plastid	23.33	21.01

Protein Annotations

EMBL:ACUP02004396	EnsemblPlants:KRH49531	EnsemblPlantsGene:GLYMA_07G161900	EntrezGene:100795926	Gene3D:3.40.50.12780	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272
PANTHER:PTHR43272:SF4	PFAM:PF00501	ProteinID:KRH49530.1	ProteinID:KRH49531	ProteinID:KRH49531.1	ScanProsite:PS00455
SUPFAM:SSF56801	UniParc:UPI0002338AE3	UniProt:I1KKP6	MapMan:50.6.2	:	:

Description

hypothetical protein

Coordinates

chr7:+:21341584..21348236

Molecular Weight (calculated)

73856.7 Da

IEP (calculated)

6.579

GRAVY (calculated)

-0.197

Length

660 amino acids

Sequence
(BLAST)

001: MPEVYTVKVE EGRPATDAKP SAGPVYRSIY AKDGLLEVPS DFESPWDFFR DSVKRNPNNK MLGRRQKTES KVGSYTWLTY QDVYDAALKM GSAMRSRGVN
101: PGDRCGIYGS NCPEWIIVME ACNSCAASYV PLYDTLGPNA VEFIINHAEV SIAFVQEKKI PSILSCLAQC SSNLKTIVSF GSVSTTQKKE AEEHGASCFS
201: WGEFLQLGCL DWDLPSKKKN DICTIMYTSG TTGDPKGVVI KNEAFMAEVL SVDHIIMLTD RVVGEDDVYF SFLPLAHVYD QIMETYCIYK GSSIGFWQGD
301: VRFLLEDVQA LKPTIFCGVP RVFDRIYAGI KSKVSSAGGL QSTLFQCAYN YKLKSLEKGL PQHKAAPLFD RLVFDKTKLA LGGRVRILLS GAAPLPRHVE
401: EFMRVTSGST LSQGYGLTES CAGCFTAIGD VYSMTGTVGV PMTTIEARLE SVPEMGYDAL SNVPRGEICL RGNTLFSGYH KREDLTKEVM VDGWFHTGDI
501: GEWQSNGAMK IIDRKKNIFK LSQGEYIAVE NIENKYLQCP LIASIWVYGN SFESFLVAVV IPERTVIEDW AKEHNVTDDF KSLCDNLKAR KYILDELNST
601: GQKHQLRGFE LLKAIHLEPI PFDMERDLIT PTFKLKRPQL LKYYKDRIDQ LYKEAKGAMA

Best Arabidopsis Sequence Match ( AT1G49430.1 )
(BLAST)

001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA

Arabidopsis Description

LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.