Factsheet for Os11t0558300-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G415100.1	Wheat	peroxisome	85.78	85.65
TraesCS5D01G420300.1	Wheat	golgi	85.78	85.65
TraesCS5A01G411500.2	Wheat	golgi	85.93	85.54
KXG28707	Sorghum	peroxisome	85.63	85.11
HORVU5Hr1G099350.15	Barley	peroxisome	85.48	84.58
Zm00001d053127_P005	Maize	mitochondrion	83.51	83.13
KRH48841	Soybean	peroxisome	24.66	74.43
GSMUA_Achr7P27390_001	Banana	peroxisome	70.2	70.73
Solyc01g109180.2.1	Tomato	nucleus	68.84	69.04
PGSC0003DMT400064817	Potato	peroxisome	68.84	69.04
VIT_03s0063g01880.t01	Wine grape	peroxisome	67.62	67.83
KRG89197	Soybean	peroxisome	67.32	67.42
KRH24533	Soybean	peroxisome	66.72	67.23
KRH49531	Soybean	peroxisome	67.02	67.12
KRH29538	Soybean	peroxisome	66.57	67.07
AT1G49430.1	Thale cress	peroxisome	63.09	62.71
CDY59237	Canola	peroxisome	62.33	61.86
CDY29350	Canola	peroxisome	62.18	61.71
Bra032284.1-P	Field mustard	peroxisome	62.18	61.71
Os01t0681200-01	Rice	plasma membrane	60.06	59.7
Os06t0158000-01	Rice	plasma membrane	51.13	54.96
Os01t0655800-01	Rice	plasma membrane	53.86	52.35
Os05t0132100-02	Rice	plasma membrane	47.96	47.38
Os12t0143900-01	Rice	peroxisome	39.18	36.63
Os11t0147000-01	Rice	peroxisome	39.03	36.39
Os11t0169800-01	Rice	plastid	19.06	34.71
AT2G47245.1	Thale cress	endoplasmic reticulum	6.81	34.62
Os05t0317200-01	Rice	plastid	33.43	30.44
Os12t0168700-01	Rice	vacuole	31.92	30.23
Os03t0845500-01	Rice	plastid	24.81	21.87

Protein Annotations

Gene3D:3.40.50.12780	EntrezGene:4350728	MapMan:50.6.2	ProteinID:ABA94294.1	EMBL:AK109777	InterPro:AMP-bd_C
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ProteinID:BAF28460.1	ProteinID:BAT14464.1	ProteinID:EEE52279.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:Os11g0558300	EnsemblPlants:Os11t0558300-01	PFAM:PF00501
PFAM:PF13193	ScanProsite:PS00455	PANTHER:PTHR43272	PANTHER:PTHR43272:SF4	UniProt:Q2R2L5	SUPFAM:SSF56801
UniParc:UPI000068205D	RefSeq:XP_015616841.1	SEG:seg	:	:	:

Description

Similar to Acyl CoA synthetase (EC 6.2.1.3). (Os11t0558300-01)

Coordinates

chr11:+:20743741..20748358

Molecular Weight (calculated)

73795.0 Da

IEP (calculated)

7.736

GRAVY (calculated)

-0.187

Length

661 amino acids

Sequence
(BLAST)

001: MEETYTVKVG EATPAAGGKP SAGPVYRSIY SKDGLMKLPE DILSPWDFFS GAVKQYPKNK MLGQRKVSDG KAGDYVWLTY EEVYQKVIKI GSAIRSLRVK
101: PGGHCGIYGS NCPEWVMAMQ ACNSQGICYV PLYDTLGANA VEFIMDHAEI SIAFVQESKI QSVLSVVKRC RAHIKAIVSF GDVTSELKRE AEQLGVSCFS
201: WEEFSSMGKQ NYELPKKQKD DICTIMYTSG TTGDPKGVII TNRALIAGVM TTEHLLKVTD KVVAEDDSYF SYLPLAHIFD QVIGNYCISK GASIGFWQAD
301: IRYLMEDVQM MKPTVFCGVP RVYDRIYTGI NQKIQSGGMI AKSLFQYAYN YKLGNLRKGL KQDEASPFFD KIVFSKIKEG LGGRIRLLLS GAAPLPRHVE
401: EFMRVTSCSV LVQGYGLTES CSGCFTSIAN VFSMIGSVGP PVTTIEARLE SIPEMGYDAL SNVPRGEICL RGHTLFSGYY KRPDLTEEVF SDGWFHTGDI
501: GEWQPDGTMK IIDRKKNIFK LSQGEYVAVE VLESAYVQSP LVTSVWVYGN SFESFLVAVV VPEKQAIEDW AAQNNKTGNF AELCNDPKAR MYIQDELNKT
601: GKRLGLRGFE MLKAIHLETT PFSIEKDLVT PTFKLKRPQL LKYYKDCIDQ LYKDAKVGNK Q

Best Arabidopsis Sequence Match ( AT1G49430.1 )
(BLAST)

001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA

Arabidopsis Description

LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.