Factsheet for Os01t0655800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	plastid
TargetP:	plastid
YLoc:	peroxisome

plasma membrane: 18260611
plasma membrane: 18557835
vacuole: 18557835
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01192	Sorghum	peroxisome	81.62	84.73
HORVU3Hr1G059140.1	Barley	peroxisome	81.91	84.65
TraesCS3D01G237900.1	Wheat	peroxisome	81.47	84.19
TraesCS3B01G266100.1	Wheat	golgi	81.47	84.19
Zm00001d044016_P001	Maize	mitochondrion	81.03	84.12
TraesCS3A01G237700.3	Wheat	peroxisome	80.0	81.07
VIT_02s0025g01410.t01	Wine grape	peroxisome	70.29	72.21
Bra013735.1-P	Field mustard	peroxisome	64.41	70.31
Os01t0681200-01	Rice	plasma membrane	68.38	69.92
GSMUA_Achr6P14370_001	Banana	peroxisome	67.21	69.77
Bra033159.1-P	Field mustard	peroxisome	61.18	68.87
KRH27846	Soybean	peroxisome	66.91	68.63
KRH77642	Soybean	endoplasmic reticulum	66.91	67.81
CDY47618	Canola	peroxisome	66.18	67.47
CDY03515	Canola	peroxisome	66.03	67.32
AT4G23850.1	Thale cress	peroxisome	64.26	65.62
KRH60037	Soybean	peroxisome	63.82	65.26
Bra035259.1-P	Field mustard	peroxisome	63.53	64.86
CDX86825	Canola	peroxisome	63.53	64.86
Os06t0158000-01	Rice	plasma membrane	57.65	63.74
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	61.76	63.16
AT4G11030.1	Thale cress	peroxisome	61.76	63.06
CDX94232	Canola	peroxisome	60.29	62.03
CDY25270	Canola	peroxisome	59.85	61.76
CDY40856	Canola	peroxisome	63.38	58.8
KRG94065	Soybean	vacuole	14.71	54.64
KRH41306	Soybean	peroxisome	20.44	54.3
CDY46530	Canola	peroxisome	62.65	54.2
Os11t0558300-01	Rice	peroxisome	52.35	53.86
Bra027700.1-P	Field mustard	peroxisome	63.09	51.94
CDY64879	Canola	peroxisome	63.09	44.69
Os05t0132100-02	Rice	plasma membrane	43.24	43.95
Os12t0143900-01	Rice	peroxisome	38.53	37.06
Os11t0147000-01	Rice	peroxisome	38.24	36.67
Os11t0169800-01	Rice	plastid	19.56	36.64
Os12t0168700-01	Rice	vacuole	30.15	29.37
Os05t0317200-01	Rice	plastid	30.44	28.51
Os03t0845500-01	Rice	plastid	21.76	19.73

Protein Annotations

EnsemblPlants:Os01t0655800-01	EnsemblPlantsGene:Os01g0655800	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9	PFAM:PF00501
ProteinID:BAF05667.1	ProteinID:BAS73500.1	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801	UniParc:UPI0000DD8C3F
UniProt:Q0JKR1	MapMan:50.6.2	:	:	:	:

Description

Similar to ACS-like protein. (Os01t0655800-01)

Coordinates

chr1:+:26628877..26636906

Molecular Weight (calculated)

75834.4 Da

IEP (calculated)

8.679

GRAVY (calculated)

-0.239

Length

680 amino acids

Sequence
(BLAST)

001: SQSTGIVQTA SIHGRRDATR TRERREASKA KRSSEREKHT KKKKKRKRRA WRCSTWWRSS RAARPPTAGP PWAPPTGAPS PDNRMLGHRE IVDGKAGAYV
101: WKTYKEVFDL STKIGNSIRS RGLAKGSRCG IYGANCPEWI ITMEACNAHG IYCVPLYDTL GAGAVEFILC HAEVEIAFTE EKKIEQIFKT FPKSAEFLKT
201: IVSFGKVTQE QKENASKYGL EIYSWDEFLS LADQEFDLPV KAKTDICTIM YTSGTTGDPK GVLISNASII CLVAGVDRLL NCVNEQLEQT DVYMSYLPLA
301: HIFDRVVEEL FMFHGASIGF WRGDVKLLVE DIGTLKPTIL CAVPRVLDRI FSGLQAKIAS GGFIKSTLFN LAYKFKQFRM MKGAKHNEAA AICDKVVFSK
401: VKEGLGGNVR VILSGAAPLA THVEEYLRVV TCAHVLQGYG LTETCAGSFV SLPNQMCMIG TVGPPVPNID VCLESVPEMN YDALATRPRG EICIRGETVF
501: SGYYKREDLT KDVLIDGWFH TGDIGEWQPD GSMKIIDRKK NIFKLSQGEY VAVENLENIY GLVSAIDSIW VYGNSFESFL VAVVNPNKEA LESWAAANGI
601: SGDLEALCEN PKAKEYILGE LSKVGKEKKL KGFEFIKAVH LEPVPFDMDR DLITPTYKKK RPQLLKYYQG TIDNMYRSAK

Best Arabidopsis Sequence Match ( AT4G23850.1 )
(BLAST)

001: MSQQKKYIFQ VEEGKEGSDG RPSVGPVYRS IFAKDGFPDP IEGMDSCWDV FRMSVEKYPN NPMLGRREIV DGKPGKYVWQ TYQEVYDIVM KLGNSLRSVG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG

Arabidopsis Description

LACS4Long chain acyl-CoA synthetase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.