Factsheet for Bra033159.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
mitochondrion 2
peroxisome 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25270	Canola	peroxisome	94.87	86.95
CDX94232	Canola	peroxisome	94.7	86.54
Bra035259.1-P	Field mustard	peroxisome	93.05	84.38
AT4G11030.1	Thale cress	peroxisome	90.4	81.98
Bra013735.1-P	Field mustard	peroxisome	81.62	79.13
Solyc08g008310.2.1	Tomato	peroxisome	72.52	73.37
Solyc08g082280.2.1	Tomato	nucleus, plastid	73.51	67.48
VIT_02s0025g01410.t01	Wine grape	peroxisome	73.51	67.07
KXG27302	Sorghum	cytosol	5.96	66.67
GSMUA_Achr3P32060_001	Banana	peroxisome	71.03	65.5
KRH27846	Soybean	peroxisome	71.52	65.16
KRH77642	Soybean	endoplasmic reticulum	72.19	64.98
Os01t0681200-01	Rice	plasma membrane	71.19	64.66
GSMUA_Achr6P14370_001	Banana	peroxisome	70.03	64.58
TraesCS5B01G147300.1	Wheat	peroxisome	70.7	64.5
TraesCS5A01G148700.1	Wheat	peroxisome	70.7	64.02
Zm00001d044016_P001	Maize	mitochondrion	69.37	63.97
TraesCS5D01G144200.2	Wheat	peroxisome	70.53	63.87
HORVU3Hr1G059140.1	Barley	peroxisome	69.37	63.68
TraesCS3D01G237900.1	Wheat	peroxisome	69.21	63.53
TraesCS3B01G266100.1	Wheat	golgi	69.21	63.53
KRH60037	Soybean	peroxisome	69.54	63.16
Zm00001d043851_P001	Maize	mitochondrion	69.37	63.1
HORVU5Hr1G046950.26	Barley	peroxisome	70.36	62.41
TraesCS3A01G237700.3	Wheat	peroxisome	68.38	61.55
Os01t0655800-01	Rice	plasma membrane	68.87	61.18
TraesCS7D01G110700.1	Wheat	peroxisome	64.24	59.69
TraesCS7B01G012700.1	Wheat	peroxisome	63.41	58.92
TraesCS7A01G115900.1	Wheat	peroxisome	61.09	58.48
KRG94065	Soybean	vacuole	17.55	57.92
Os06t0158000-01	Rice	plasma membrane	58.94	57.89
Zm00001d045295_P001	Maize	extracellular	64.4	57.63
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	63.08	53.36
KRH41306	Soybean	peroxisome	22.35	52.73
Bra027700.1-P	Field mustard	peroxisome	72.02	52.66
Bra032284.1-P	Field mustard	peroxisome	52.81	47.9
Bra021392.1-P	Field mustard	peroxisome	48.01	43.94
Bra004467.1-P	Field mustard	peroxisome	47.68	41.32
Bra020793.1-P	Field mustard	plastid	35.26	33.86
Bra001177.1-P	Field mustard	plastid	38.24	33.19
Bra009951.1-P	Field mustard	peroxisome	38.24	33.09
PGSC0003DMT400014954	Potato	cytosol	5.79	30.17
Bra003678.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	32.12	27.99
Bra013210.1-P	Field mustard	peroxisome	32.45	27.18
Bra001919.1-P	Field mustard	plastid	22.68	19.08
Bra032757.1-P	Field mustard	plastid	21.52	18.08

Protein Annotations

EnsemblPlants:Bra033159.1	EnsemblPlants:Bra033159.1-P	EnsemblPlantsGene:Bra033159	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9
PFAM:PF00501	ScanProsite:PS00455	SUPFAM:SSF56801	UniParc:UPI00025455C6	UniProt:M4EWH5	MapMan:50.6.2

Description

AT4G11030 (E=0.0) | long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative

Coordinates

chrA02:-:17068708..17072020

Molecular Weight (calculated)

66948.8 Da

IEP (calculated)

6.168

GRAVY (calculated)

-0.084

Length

604 amino acids

Sequence
(BLAST)

001: MLGQREIVNE KAGKYEWKTY KEVYDIVIKL GNSLRSCGFE EGGKCGIYGA NCPEWIISME ACNAHGLYCI PLYDTLGAGA VEFIISHAEV AIAFVEEKKI
101: PELFKTCPNS TKYMKTVVSF GGVKPEQKEE AEKLGLVIHA WDEFLKLGEG KQYELPVKKK SDICTIMYTS GTTGDPKGVL ISNESIVTIT TGVMHFLQSV
201: NESLTEKDVY ISYLPLAHVF DLAIEECIIQ VGGSIGFWRG DVKLLIEDLG ELKPSIFCAV PRVLDRVYTG LQQKLSVGGF FKKKVFNVAF SYKFGNMKKG
301: QSHVAAAPFC DKLVFNKVKQ GLGGNVRIIL SGAAPLASHI ESFLRVVACC HVLQGYGLTE SCAGTFVTFP DDLDMLGTVG PPVPNVDIRL ESVPDMEYDA
401: LGSTPRGEIC IRGKTLFSGY HKREDLTKEV LIDGWFHTGD VGEWQPDGSM KIIDRKKNIF KLAQGEYVAV ESLENVYGQV EAIDSVWVYG NSFESFLIAV
501: VNPTQRTLES WAVENGVDGD FNSICQNAKA KAFILGELVK AGRERKLKGF EIIRAVHLEP VAFDIERDLL TPTYKKKRPQ LLKYYQNVID EIYKAAKEGQ
601: GSGQ

Best Arabidopsis Sequence Match ( AT4G11030.1 )
(BLAST)

001: MTSQKRFIFE VEAAKEATDG NPSVGPVYRS TFAQNGFPNP IDGIQSCWDI FRTAVEKYPN NRMLGRREIS NGKAGKYVWK TYKEVYDIVI KLGNSLRSCG
101: IKEGEKCGIY GINCCEWIIS MEACNAHGLY CVPLYDTLGA GAVEFIISHA EVSIAFVEEK KIPELFKTCP NSTKYMKTVV SFGGVKPEQK EEAEKLGLVI
201: HSWDEFLKLG EGKQYELPIK KPSDICTIMY TSGTTGDPKG VMISNESIVT ITTGVMHFLG NVNASLSEKD VYISYLPLAH VFDRAIEECI IQVGGSIGFW
301: RGDVKLLIED LGELKPSIFC AVPRVLDRVY TGLQQKLSGG GFFKKKVFDV AFSYKFGNMK KGQSHVAASP FCDKLVFNKV KQGLGGNVRI ILSGAAPLAS
401: HIESFLRVVA CCNVLQGYGL TESCAGTFAT FPDELDMLGT VGPPVPNVDI RLESVPEMNY DALGSTPRGE ICIRGKTLFS GYYKREDLTK EVFIDGWLHT
501: GDVGEWQPNG SMKIIDRKKN IFKLAQGEYV AVENLENVYS QVEVIESIWV YGNSFESFLV AIANPAQQTL ERWAVENGVN GDFNSICQNA KAKAFILGEL
601: VKTAKENKLK GFEIIKDVHL EPVAFDMERD LLTPTYKKKR PQLLKYYQNV IHEMYKTTKE SLASGQ

Arabidopsis Description

LACS5Long chain acyl-CoA synthetase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9T009]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.