Factsheet for Bra009951.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 2
mitochondrion 2
peroxisome 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002826.1-P
Bra028938.1-P
Bra035613.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G27600.1	Bra002826.1-P	AT5G56290.1	16256065
AT5G27600.1	Bra028938.1-P	AT5G56290.1	16256065
AT5G27600.1	Bra035613.1-P	AT5G56290.1	16256065

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86151	Canola	peroxisome	100.0	99.86
AT5G27600.1	Thale cress	peroxisome, plastid	86.53	86.29
Solyc01g099100.2.1	Tomato	plastid	74.36	74.57
VIT_14s0128g00720.t01	Wine grape	peroxisome	66.91	73.78
Bra001177.1-P	Field mustard	plastid	73.35	73.56
Bra020793.1-P	Field mustard	plastid	65.19	72.34
EES15543	Sorghum	peroxisome	69.91	71.55
Zm00001d023238_P002	Maize	plasma membrane	70.77	71.49
Os12t0143900-01	Rice	peroxisome	71.35	70.44
Zm00001d052485_P001	Maize	mitochondrion, peroxisome	70.06	70.26
TraesCS5B01G131800.3	Wheat	peroxisome	70.63	70.23
TraesCS4A01G184900.2	Wheat	peroxisome	69.77	69.97
TraesCS5A01G133200.2	Wheat	peroxisome	70.2	69.8
TraesCS4D01G128700.3	Wheat	mitochondrion	69.34	69.54
TraesCS5D01G141300.1	Wheat	peroxisome	69.91	69.52
KXG27718	Sorghum	peroxisome	69.34	69.44
TraesCS4B01G133700.3	Wheat	peroxisome	69.2	69.4
Os11t0147000-01	Rice	peroxisome	70.2	69.11
HORVU5Hr1G040740.17	Barley	peroxisome	68.62	66.99
HORVU4Hr1G025820.9	Barley	peroxisome, plastid	68.34	63.6
PGSC0003DMT400063438	Potato	peroxisome	7.74	58.7
Bra013735.1-P	Field mustard	peroxisome	35.53	39.81
Bra033159.1-P	Field mustard	peroxisome	33.09	38.24
Bra035259.1-P	Field mustard	peroxisome	36.39	38.14
Bra032284.1-P	Field mustard	peroxisome	35.39	37.09
Bra021392.1-P	Field mustard	peroxisome	34.1	36.06
Bra004467.1-P	Field mustard	peroxisome	34.24	34.29
Bra003678.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	30.66	30.88
Bra027700.1-P	Field mustard	peroxisome	35.39	29.9
Bra013210.1-P	Field mustard	peroxisome	30.37	29.4
Bra032757.1-P	Field mustard	plastid	23.21	22.53
Bra001919.1-P	Field mustard	plastid	23.07	22.42

Protein Annotations

Gene3D:2.30.38.10	Gene3D:3.40.50.12780	Gene3D:3.40.50.980	MapMan:5.7.3.1	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
EnsemblPlantsGene:Bra009951	EnsemblPlants:Bra009951.1	EnsemblPlants:Bra009951.1-P	GO:GO:0001676	GO:GO:0003674	GO:GO:0003824
GO:GO:0004467	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777
GO:GO:0006629	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009651
GO:GO:0009987	GO:GO:0010193	UniProt:M4D0F3	PFAM:PF00501	ScanProsite:PS00455	PANTHER:PTHR43272
PANTHER:PTHR43272:SF17	SUPFAM:SSF56801	UniParc:UPI000253F4AA	:	:	:

Description

AT5G27600 (E=0.0) LACS7, ATLACS7 | LACS7 (LONG-CHAIN ACYL-COA SYNTHETASE 7); long-chain-fatty-acid-CoA ligase/ protein binding

Coordinates

chrA06:-:18273524..18277693

Molecular Weight (calculated)

76871.1 Da

IEP (calculated)

6.998

GRAVY (calculated)

-0.136

Length

698 amino acids

Sequence
(BLAST)

001: MEFSSPAQRR LQTLRSHLDS SQADDQLSLF LNATASAAPF SNEDSYSVVL PEKLDTGIWN VHRSAKSPTK LFSRFPNHPE IGTLHDNFVH AVETYPDNKY
101: LGTRARPDGT IGEYTWMTYA ETASARQAIG SGLIYNGINH GACVGLYFIN RPEWLAVDHA CAAYSFISVP LYDTLGPDAV KFVVNHATLQ AIFCVPQTLN
201: TLLSFLSEIP TIRLVVVVGG ADENLPSLPP GSGVKIVSYQ KLLSQGRSSV HPFSPPKPED IATICYTSGT TGTPKGAMLS HENLISNVAG SSLSINFLPD
301: DIYISYLPLA HIYERSNQIM GVYGGVSIGF YQGDIMKLMD DLAVLRPTVF CSVPRLYNRV YDGITSAVKS SGVTKRRLFQ LAYNSKKKAI LNGRSPSPLW
401: DKLVFNKIKE KLGGRVRFMG SGASPLSPDV MDFLRVCFGC SVREGYGMTE TSCVISSMDE GDNLSGHVGS PNPACEVKLV DVPEMNYTSE DQPYPRGEIC
501: VRGPIIFKGY YKDEEQTKEI MDVDGWLHTG DIGLWLPGGR LKIIDRKKNI FKLAQGEYIA PEKIENVYTK CRFVSQCFIH GDSFNSSLVA IVAVDPDVMK
601: DWAASEGIKY ENLAQLCKDP KVRKAVLAEM DIVGREAQLR GFEFAKAVTL VPEPFTLENG LLTPTFKVKR PQAKAYFAEA ISKMYAEIAS SDPVPSKL

Best Arabidopsis Sequence Match ( AT5G27600.1 )
(BLAST)

001: MEFASPEQRR LETIRSHIDT SPTNDQSSSL FLNATASSAS PFFKEDSYSV VLPEKLDTGK WNVYRSKRSP TKLVSRFPDH PEIGTLHDNF VHAVETYAEN
101: KYLGTRVRSD GTIGEYSWMT YGEAASERQA IGSGLLFHGV NQGDCVGLYF INRPEWLVVD HACAAYSFVS VPLYDTLGPD AVKFVVNHAN LQAIFCVPQT
201: LNILLSFLAE IPSIRLIVVV GGADEHLPSL PRGTGVTIVS YQKLLSQGRS SLHPFSPPKP EDIATICYTS GTTGTPKGVV LTHGNLIANV AGSSVEAEFF
301: PSDVYISYLP LAHIYERANQ IMGVYGGVAV GFYQGDVFKL MDDFAVLRPT IFCSVPRLYN RIYDGITSAV KSSGVVKKRL FEIAYNSKKQ AIINGRTPSA
401: FWDKLVFNKI KEKLGGRVRF MGSGASPLSP DVMDFLRICF GCSVREGYGM TETSCVISAM DDGDNLSGHV GSPNPACEVK LVDVPEMNYT SDDQPYPRGE
501: ICVRGPIIFK GYYKDEEQTR EILDGDGWLH TGDIGLWLPG GRLKIIDRKK NIFKLAQGEY IAPEKIENVY TKCRFVSQCF IHGDSFNSSL VAIVSVDPEV
601: MKDWAASEGI KYEHLGQLCN DPRVRKTVLA EMDDLGREAQ LRGFEFAKAV TLVPEPFTLE NGLLTPTFKI KRPQAKAYFA EAISKMYAEI AASNPIPSKL

Arabidopsis Description

LACS7Long chain acyl-CoA synthetase 7, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8LKS5]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.