Factsheet for Bra001919.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
peroxisome 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67321	Canola	plastid	98.61	98.61
AT3G23790.1	Thale cress	plastid	87.88	87.4
Bra032757.1-P	Field mustard	plastid	76.46	76.36
VIT_08s0032g00050.t01	Wine grape	plastid	66.3	65.21
KRH31560	Soybean	plastid	65.32	65.14
GSMUA_Achr8P08820_001	Banana	peroxisome	33.84	64.63
PGSC0003DMT400053079	Potato	cytosol	55.43	64.19
HORVU5Hr1G120850.1	Barley	plastid	60.17	63.07
KRH58837	Soybean	plastid	64.07	62.76
Solyc09g092450.2.1	Tomato	plastid	63.09	62.66
TraesCS4A01G336400.4	Wheat	plastid	60.86	59.54
KXG37146	Sorghum	plastid	60.86	59.21
TraesCS5D01G533700.1	Wheat	plastid	60.45	59.21
TraesCS5B01G536200.1	Wheat	plastid	59.75	59.17
TraesCS5D01G533800.3	Wheat	mitochondrion, plastid	60.86	59.13
TraesCS4A01G336500.2	Wheat	mitochondrion, plastid	61.0	58.95
Os03t0845500-01	Rice	plastid	60.45	57.87
TraesCS5B01G536300.1	Wheat	mitochondrion, plastid	60.45	57.48
Zm00001d034832_P006	Maize	plastid	60.59	54.51
HORVU1Hr1G032500.2	Barley	peroxisome	11.42	51.9
GSMUA_Achr8P08810_001	Banana	mitochondrion	12.95	46.97
Bra021392.1-P	Field mustard	peroxisome	22.98	25.0
Bra032284.1-P	Field mustard	peroxisome	22.84	24.62
Bra013735.1-P	Field mustard	peroxisome	21.03	24.24
Bra001177.1-P	Field mustard	plastid	23.4	24.14
Bra020793.1-P	Field mustard	plastid	20.75	23.69
Bra004467.1-P	Field mustard	peroxisome	22.98	23.67
Bra009951.1-P	Field mustard	peroxisome	22.42	23.07
Bra035259.1-P	Field mustard	peroxisome	21.17	22.82
Bra033159.1-P	Field mustard	peroxisome	19.08	22.68
Bra003678.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	21.73	22.51
Bra013210.1-P	Field mustard	peroxisome	21.17	21.08
Bra027700.1-P	Field mustard	peroxisome	21.17	18.4

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	InterPro:AMP-binding	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
EnsemblPlantsGene:Bra001919	EnsemblPlants:Bra001919.1	EnsemblPlants:Bra001919.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009536
GO:GO:0009941	UniProt:M4CCI9	PFAM:PF00501	PRINTS:PR00154	ScanProsite:PS00455	PANTHER:PTHR43813
PANTHER:PTHR43813:SF2	SUPFAM:SSF56801	UniParc:UPI00025407A9	:	:	:

Description

AT3G23790 (E=0.0) | AMP-binding protein, putative

Coordinates

chrA03:+:19343085..19347607

Molecular Weight (calculated)

80402.5 Da

IEP (calculated)

8.704

GRAVY (calculated)

-0.238

Length

718 amino acids

Sequence
(BLAST)

001: MTSTSLAPSV LVSRFSSSPR EFQDSGSYKC FSRRTRVPSR LRFRVQEKEL GRCSPFLERL TVPGGDAAAA LRSNEWKAVP DIWRSSAEKY GDRVAVVDPY
101: HDPPSTFTYR QLEQEILDFV EGLRAVGVKA DEKIALFADN SCRWLVADQG IMATGAVNVV RGSRSSVEEL LHIYCHSDSV GLVVDNPEFF NRIADTFSYK
201: ASLKFVILLW GDKSSLATSS RQTPVYSYNE IKNLGQERRA EHAGSNDAGK YEYEFIGPDD TATIMYTSGT TGNPKGVMLT HQNLLHQIRN LSEFVPAKAG
301: ERFLSMLPSW HAYERACEYF IFTCGVEQKY TSIRFLKDDL KRYQPHYLIS VPLVYETLYS GIQKQISTSS PVRKFLALSL IRISLAYTEM RRVYEGLCLT
401: KNQKPPVYIV ALVDWLWARV VAFVLWPLHM LAEKLVHKKI RSSIGITKAG VSGGGSLPMH IDKFFEAIGV NVQNGYGLTE TSPVVSARRI SCNVLGSVGH
501: PIKDTEFKIV DQETGNVLPP GSKGIVKVRG PPVMRGYYKN PMATKQVIDD DGWFNTGDMG WIAPHHSTGR RRSCGGVIVL EGRAKDTIVL STGENVEPLE
601: IEEAALRSSL IQQIVVIGQD QRRLGAIVIP NKEAAEGVAK NKISAVDPEV NELSKETLTS MVYEELRKWT SECSFQVGPV LIVEEPFTID NGFMTPTMKI
701: RRDKVVDRYK DEIARLYK

Best Arabidopsis Sequence Match ( AT3G23790.1 )
(BLAST)

001: MASTSLGASI LVSHCSSAPE FQVSGMRLVF GYKAFGCRTS RRGFRVRCES KIQEKELRRC SPFLERLSLP REAALSSNEW KSVPDIWRSS VEKYGDRVAV
101: VDPYHDPPST FTYRQLEQEI LDFVEGLRVV GVKADEKIAL FADNSCRWLV ADQGIMATGA VNVVRGSRSS VEELLQIYCH SESVALVVDN PEFFNRIAES
201: FSYKAAPKFV ILLWGEKSSL VTAGRHTPVY SYNEIKKFGQ ERRAKFARSN DSGKYEYEYI DPDDIATIMY TSGTTGNPKG VMLTHQNLLH QIRNLSDFVP
301: AEAGERFLSM LPSWHAYERA CEYFIFTCGV EQKYTSIRFL KDDLKRYQPH YLISVPLVYE TLYSGIQKQI SASSPARKFL ALTLIKVSLA YTEMKRVYEG
401: LCLTKNQKPP MYIVSLVDWL WARVVAFFLW PLHMLAEKLV HRKIRSSIGI TKAGVSGGGS LPMHVDKFFE AIGVNVQNGY GLTETSPVVS ARRLRCNVLG
501: SVGHPIKDTE FKIVDHETGT VLPPGSKGIV KVRGPPVMKG YYKNPLATKQ VIDDDGWFNT GDMGWITPQH STGRSRSCGG VIVLEGRAKD TIVLSTGENV
601: EPLEIEEAAM RSNLIQQIVV IGQDQRRLGA IVIPNKEAAE GAAKQKISPV DSEVNELSKE TITSMVYEEL RKWTSQCSFQ VGPVLIVDEP FTIDNGLMTP
701: TMKIRRDKVV DQYKNEIERL YK

Arabidopsis Description

AAE16Probable acyl-activating enzyme 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LK39]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.