Factsheet for Solyc09g092450.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053079	Potato	cytosol	79.39	92.58
VIT_08s0032g00050.t01	Wine grape	plastid	70.4	69.73
KRH58837	Soybean	plastid	68.88	67.94
KRH31560	Soybean	plastid	67.22	67.5
AT3G23790.1	Thale cress	plastid	64.73	64.82
Bra032757.1-P	Field mustard	plastid	63.9	64.26
CDY01190	Canola	plastid	63.76	64.12
CDY12731	Canola	plastid	63.49	63.31
AT4G14070.1	Thale cress	plastid	63.62	63.27
Bra001919.1-P	Field mustard	plastid	62.66	63.09
CDY67321	Canola	plastid	62.52	62.95
GSMUA_Achr8P08820_001	Banana	peroxisome	32.64	62.77
HORVU5Hr1G120850.1	Barley	plastid	58.51	61.75
CDY53212	Canola	plastid	63.07	60.96
KXG37146	Sorghum	plastid	61.0	59.76
Os03t0845500-01	Rice	plastid	61.13	58.93
TraesCS5D01G533800.3	Wheat	mitochondrion, plastid	59.89	58.59
TraesCS4A01G336500.2	Wheat	mitochondrion, plastid	60.03	58.41
TraesCS5D01G533700.1	Wheat	plastid	59.2	58.39
TraesCS4A01G336400.4	Wheat	plastid	59.2	58.31
TraesCS5B01G536200.1	Wheat	plastid	58.37	58.21
TraesCS5B01G536300.1	Wheat	mitochondrion, plastid	59.61	57.09
Zm00001d034832_P006	Maize	plastid	60.86	55.14
HORVU1Hr1G032500.2	Barley	peroxisome	10.65	48.73
GSMUA_Achr8P08810_001	Banana	mitochondrion	13.14	47.98
Solyc08g008310.2.1	Tomato	peroxisome	21.85	26.47
Solyc08g082280.2.1	Tomato	nucleus, plastid	23.37	25.68
Solyc09g075790.2.1	Tomato	peroxisome	21.02	24.2
Solyc11g018580.1.1	Tomato	plastid	20.33	24.1
Solyc01g095750.2.1	Tomato	peroxisome	21.16	23.15
Solyc01g099100.2.1	Tomato	plastid	22.27	23.13
Solyc01g109180.2.1	Tomato	nucleus	21.02	23.07
Solyc09g075770.1.1	Tomato	peroxisome	21.3	22.06
Solyc07g045290.2.1	Tomato	plastid	20.47	20.39
Solyc12g009040.1.1	Tomato	plastid	20.19	20.33

Protein Annotations

EnsemblPlants:Solyc09g092450.2.1	EnsemblPlantsGene:Solyc09g092450.2	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ncoils:Coil	PANTHER:PTHR43813
PANTHER:PTHR43813:SF2	PFAM:PF00501	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801	UniParc:UPI000276BB8F
UniProt:K4CWS1	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr9:-:71534857..71545824

Molecular Weight (calculated)

80444.0 Da

IEP (calculated)

8.287

GRAVY (calculated)

-0.164

Length

723 amino acids

Sequence
(BLAST)

001: MITTTMSLKS NLFATPCRGR HGVSQFWSQQ QLVTILVSKS RKLGRVHCQS KTAEVDIRKC SPFLESELLS GNGGLPLTEW RTVPDIWRTS AEKFGDRVAV
101: VDPYHDPPTT MTYKQLDQEI VDFSEGLRVI GLKPHEKIAL FADNSCRWLV ADQGMMASGA INVVRGSRSS DQELLQLYSH SESVALAIDN PEMYNRIADT
201: FGSHAALRFV ILLWGEKSSL VTEARQGYPI YTYKEIVELG HKSRVDLLDS EDARKRYSYE AINSDDVATL VYTSGTTGNP KGVMLTHKNL LHQILNLWEI
301: VPAVPGDRFL SMLPPWHAYE RACEYFIFTR GTEQVYTTVK NLKEDLRRYQ PHYLISVPLV YETLYSGIIK QINSNSAARK HIAQLFLRIS MAYMEAKRIY
401: EGKCLTKDTK QPSYIVSLLD WLWAQTIAAI LLPLHMLAKK IVYSKIHSGI GISKAGISGG GSLSSHVDKF FEAIDIKIQN GYGLTESAPV IAARSLTCNV
501: LGSIGRPIRH VEVKVVNSET DEVLPPGSKG TVKARGPLIM KGYYKNPVAT KQAIDENGWL NTGDLGWIVP DLSIGRSRNC GGAIVLEGRA KDTIVLSTGE
601: NVEPSEIEEA AMGSSLIQQI VIIGQDQRRL GAIIVPNKEE VLLAAKRSAI VDSETTEVSK DKALGLLHEE LRKWTSDCSF QVGPILVVDQ PFTIDSGLLT
701: PTMKIKRDRV AALYKEQIDN LYK

Best Arabidopsis Sequence Match ( AT3G23790.1 )
(BLAST)

001: MASTSLGASI LVSHCSSAPE FQVSGMRLVF GYKAFGCRTS RRGFRVRCES KIQEKELRRC SPFLERLSLP REAALSSNEW KSVPDIWRSS VEKYGDRVAV
101: VDPYHDPPST FTYRQLEQEI LDFVEGLRVV GVKADEKIAL FADNSCRWLV ADQGIMATGA VNVVRGSRSS VEELLQIYCH SESVALVVDN PEFFNRIAES
201: FSYKAAPKFV ILLWGEKSSL VTAGRHTPVY SYNEIKKFGQ ERRAKFARSN DSGKYEYEYI DPDDIATIMY TSGTTGNPKG VMLTHQNLLH QIRNLSDFVP
301: AEAGERFLSM LPSWHAYERA CEYFIFTCGV EQKYTSIRFL KDDLKRYQPH YLISVPLVYE TLYSGIQKQI SASSPARKFL ALTLIKVSLA YTEMKRVYEG
401: LCLTKNQKPP MYIVSLVDWL WARVVAFFLW PLHMLAEKLV HRKIRSSIGI TKAGVSGGGS LPMHVDKFFE AIGVNVQNGY GLTETSPVVS ARRLRCNVLG
501: SVGHPIKDTE FKIVDHETGT VLPPGSKGIV KVRGPPVMKG YYKNPLATKQ VIDDDGWFNT GDMGWITPQH STGRSRSCGG VIVLEGRAKD TIVLSTGENV
601: EPLEIEEAAM RSNLIQQIVV IGQDQRRLGA IVIPNKEAAE GAAKQKISPV DSEVNELSKE TITSMVYEEL RKWTSQCSFQ VGPVLIVDEP FTIDNGLMTP
701: TMKIRRDKVV DQYKNEIERL YK

Arabidopsis Description

AAE16Probable acyl-activating enzyme 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LK39]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.