CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67321	Canola	plastid	92.91	96.8
AT3G23790.1	Thale cress	plastid	84.22	87.26
CDY01190	Canola	plastid	74.47	77.47
CDY12731	Canola	plastid	73.66	76.0
KRH31560	Soybean	plastid	63.64	66.11
VIT_08s0032g00050.t01	Wine grape	plastid	63.9	65.48
PGSC0003DMT400053079	Potato	cytosol	53.61	64.68
GSMUA_Achr8P08820_001	Banana	peroxisome	32.49	64.63
KRH58837	Soybean	plastid	61.9	63.17
Solyc09g092450.2.1	Tomato	plastid	60.96	63.07
HORVU5Hr1G120850.1	Barley	plastid	57.35	62.63
TraesCS5D01G533800.3	Wheat	mitochondrion, plastid	59.36	60.08
TraesCS4A01G336500.2	Wheat	mitochondrion, plastid	59.49	59.89
TraesCS4A01G336400.4	Wheat	plastid	58.56	59.67
KXG37146	Sorghum	plastid	58.56	59.35
TraesCS5B01G536200.1	Wheat	plastid	57.49	59.31
TraesCS5D01G533700.1	Wheat	plastid	57.89	59.07
TraesCS5B01G536300.1	Wheat	mitochondrion, plastid	58.96	58.41
Os03t0845500-01	Rice	plastid	58.42	58.27
Zm00001d034832_P006	Maize	plastid	58.29	54.64
HORVU1Hr1G032500.2	Barley	peroxisome	10.7	50.63
GSMUA_Achr8P08810_001	Banana	mitochondrion	12.97	48.99
CDX92843	Canola	peroxisome	8.29	28.97
CDY68722	Canola	peroxisome	10.7	28.17
CDX80092	Canola	mitochondrion, peroxisome	10.96	27.99
CDY69216	Canola	peroxisome	14.97	27.18
CDY37793	Canola	peroxisome	14.97	25.99
CDX80093	Canola	peroxisome	14.97	25.99
CDY51419	Canola	peroxisome	21.93	24.85
CDY27501	Canola	peroxisome	21.79	24.7
CDY29350	Canola	peroxisome	21.79	24.47
CDY59237	Canola	peroxisome	21.66	24.32
CDY27725	Canola	plastid	21.93	23.87
CDY05217	Canola	plastid	21.93	23.87
CDY49993	Canola	mitochondrion	22.19	23.85
CDX74115	Canola	plastid	22.06	23.71
CDY03515	Canola	peroxisome	20.99	23.54
CDY47618	Canola	peroxisome	20.86	23.39
CDX80638	Canola	peroxisome	21.39	22.89
CDX86151	Canola	peroxisome	21.26	22.75
CDX86825	Canola	peroxisome	20.19	22.67
CDX68052	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	20.59	22.22
CDX79212	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	20.59	22.22
CDX95713	Canola	peroxisome	19.92	21.75
CDY15082	Canola	peroxisome	20.19	21.09
CDY66248	Canola	peroxisome	20.19	20.94
CDY40856	Canola	peroxisome	19.92	20.33
CDY25270	Canola	peroxisome	17.51	19.88
CDX94232	Canola	peroxisome	17.51	19.82
CDY65251	Canola	peroxisome	6.02	19.23
CDY46530	Canola	peroxisome	20.05	19.08
CDY72011	Canola	peroxisome	4.68	16.59
CDY71490	Canola	extracellular, peroxisome	3.34	16.23
CDY64879	Canola	peroxisome	20.19	15.73

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	GO:A0A078IT86	UniProt:A0A078IT86	InterPro:AMP-binding
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	EnsemblPlants:CDY53212	ProteinID:CDY53212	ProteinID:CDY53212.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSBRNA2T00010215001	PFAM:PF00501	PRINTS:PR00154
ScanProsite:PS00455	PANTHER:PTHR43813	PANTHER:PTHR43813:SF2	SUPFAM:SSF56801	UniParc:UPI0004EE3C05	SEG:seg

Description

BnaC03g74060DBnaC03g74060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IT86]

Coordinates

chrLK033175:-:54828..59711

Molecular Weight (calculated)

83464.2 Da

IEP (calculated)

8.304

GRAVY (calculated)

-0.167

Length

748 amino acids

Sequence
(BLAST)

001: MFLASSSLSL SLSLIFTPTP VTSFFLSLSA MASTSLAPSV LVSRFYSSPR EFQDSGNYKC FSRRTRVSSR LRFRVQEKEL GRCSPFLEGL TVPGNDASAA
101: LRSNEWKAVP DIWRSSAEKY GDRVAVVDPY HDPPSTFTYR QLEQEILDFV EGLRAVGVKA DEKIALFADN SCRWLVADQG IMATGAVNVV RGSRSSVEEL
201: LHIYCHSDSV GLVVDNPEFF NRIADTFSYK ASLKFVILLW GDKSSLATSS RQTPVYSYNE IKNLGQERRA EHAGSSDAGK YEYEFIGPDD TATIMYTSGT
301: TGNPKGVMLT HQNLLHQIRN LSEFVPAKAG ERFLSMLPSW HAYERACEYF IFTCGVEQKY TSIRFLKDDL KRYQPHYLIS VPLVYETLYS GIQKQISTSS
401: PVRKFLALTL IRISLAYTEM RRVYEGLCLT KSQKPPVYIV ALVDWLCARV VAFVLWPLHM LAEKLVYKKI RSSIGITKAG VTGGGSLPMH IDKFFEAIGV
501: NVQNGYGLTE TSPVVSARRL SCNVLGSVGH PIKDTEFKIV DQETGTVLPP GSKGIVKVRG PPVMRGYYKN PVASKQVIDD DGWFNTGDMG WIAPHHSTGR
601: SRSCGGVIVL EGRAKDTIVL STGENVEPLE IEEAAMRSSL IQQIVVIGQD QRRLGAIVIP NKEAAEGVAK NKISPVDPEV NELSKETLTS MVYEELRKWT
701: SECSFQVGPV LIVEEPFTID NGFMTPTMKI RRDKVVDRYK DEIDRLYK

Best Arabidopsis Sequence Match ( AT3G23790.1 )
(BLAST)

001: MASTSLGASI LVSHCSSAPE FQVSGMRLVF GYKAFGCRTS RRGFRVRCES KIQEKELRRC SPFLERLSLP REAALSSNEW KSVPDIWRSS VEKYGDRVAV
101: VDPYHDPPST FTYRQLEQEI LDFVEGLRVV GVKADEKIAL FADNSCRWLV ADQGIMATGA VNVVRGSRSS VEELLQIYCH SESVALVVDN PEFFNRIAES
201: FSYKAAPKFV ILLWGEKSSL VTAGRHTPVY SYNEIKKFGQ ERRAKFARSN DSGKYEYEYI DPDDIATIMY TSGTTGNPKG VMLTHQNLLH QIRNLSDFVP
301: AEAGERFLSM LPSWHAYERA CEYFIFTCGV EQKYTSIRFL KDDLKRYQPH YLISVPLVYE TLYSGIQKQI SASSPARKFL ALTLIKVSLA YTEMKRVYEG
401: LCLTKNQKPP MYIVSLVDWL WARVVAFFLW PLHMLAEKLV HRKIRSSIGI TKAGVSGGGS LPMHVDKFFE AIGVNVQNGY GLTETSPVVS ARRLRCNVLG
501: SVGHPIKDTE FKIVDHETGT VLPPGSKGIV KVRGPPVMKG YYKNPLATKQ VIDDDGWFNT GDMGWITPQH STGRSRSCGG VIVLEGRAKD TIVLSTGENV
601: EPLEIEEAAM RSNLIQQIVV IGQDQRRLGA IVIPNKEAAE GAAKQKISPV DSEVNELSKE TITSMVYEEL RKWTSQCSFQ VGPVLIVDEP FTIDNGLMTP
701: TMKIRRDKVV DQYKNEIERL YK

Arabidopsis Description

AAE16Probable acyl-activating enzyme 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LK39]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.