Factsheet for TraesCS4A01G336400.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G533700.1	Wheat	plastid	95.91	96.04
TraesCS5B01G536200.1	Wheat	plastid	94.41	95.59
TraesCS4A01G336500.2	Wheat	mitochondrion, plastid	86.51	85.46
HORVU1Hr1G032500.2	Barley	peroxisome	16.48	76.58
Os03t0845500-01	Rice	plastid	77.38	75.73
KXG37146	Sorghum	plastid	74.93	74.53
Zm00001d034832_P006	Maize	plastid	75.89	69.8
GSMUA_Achr8P08820_001	Banana	peroxisome	35.01	68.35
VIT_08s0032g00050.t01	Wine grape	plastid	62.53	62.88
PGSC0003DMT400053079	Potato	cytosol	52.45	62.1
AT3G23790.1	Thale cress	plastid	59.95	60.94
Bra001919.1-P	Field mustard	plastid	59.54	60.86
CDY67321	Canola	plastid	59.26	60.59
KRH31560	Soybean	plastid	58.86	60.0
KRH58837	Soybean	plastid	59.81	59.89
Bra032757.1-P	Field mustard	plastid	58.58	59.81
CDY01190	Canola	plastid	58.45	59.67
Solyc09g092450.2.1	Tomato	plastid	58.31	59.2
CDY12731	Canola	plastid	58.17	58.9
AT4G14070.1	Thale cress	plastid	58.31	58.87
CDY53212	Canola	plastid	59.67	58.56
GSMUA_Achr8P08810_001	Banana	mitochondrion	14.44	53.54
TraesCS7A01G115900.1	Wheat	peroxisome	21.66	25.2
TraesCS1A01G075000.1	Wheat	golgi	22.75	24.93
TraesCS4A01G207000.1	Wheat	golgi	21.66	22.71
TraesCS5A01G148700.1	Wheat	peroxisome	20.57	22.64
TraesCS5A01G411500.2	Wheat	golgi	20.44	22.59
TraesCS3A01G237700.3	Wheat	peroxisome	20.57	22.5
TraesCS5A01G133200.2	Wheat	peroxisome	21.25	22.22
TraesCS4A01G184900.2	Wheat	peroxisome	20.84	21.98
TraesCS5A01G117700.1	Wheat	endoplasmic reticulum, vacuole	20.3	21.35
TraesCS5A01G169600.1	Wheat	golgi	20.98	21.15

Protein Annotations

EnsemblPlants:TraesCS4A01G336400.4	EnsemblPlantsGene:TraesCS4A01G336400	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43813	PANTHER:PTHR43813:SF2
PFAM:PF00501	ScanProsite:PS00455	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF56801	TIGR:cd05907
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:618620274..618627946

Molecular Weight (calculated)

80500.8 Da

IEP (calculated)

7.985

GRAVY (calculated)

-0.140

Length

734 amino acids

Sequence
(BLAST)

001: MAHTGPAGTL AMLLLAPSAA GQTWAPRPAA PPLRRRLLAA RRGRVCVPRC TGAAPPPRPG ATTHSPARSK CSPLLESALL SPAGNEPAAD EWKAVPDIWR
101: TAAEKYPDSV ALVDPYHDPP SELTYKQLEQ QILDFSHGLR AVGVAPDEKV ALFADNSCRW LVADQGIMAT GAINVVRGTK SSDEELFQIY SHSESIALVV
201: DSPQFFNRLA ETFISRINAR FIVLLWGDKS SLNSKAVMDI PVYDYNDITE LGRENRNALC YSSEQGRQGV FEAITPEDVA TLIYTSGTSG APKGVMLTHR
301: NLLHQINNMW EIVPAVPGDR FLSMLPPWHA YERSAEYFIL THGTQQIYSS VKYLKADLQK YQPHYVFSVP LVYETLYSSI QRQISSSSPA RKTVALALIK
401: ISLLYMEAKK IFEGTVLSKN PVKPSSISYM FNCLWARIVA ALLWPLHNLA NMLVYKKIHS TIGISKAAIS GGGSLPMHVD KFFEAIGIKV QNGYGLTETS
501: PAVAARRPFC NVLGTVGHPI KHTEIKIVDI ETGEVLPDGS KGIVKIKGPP VMKGYYKNPS ATNNALDQEG WFNTGDIGWI APHHATGPSR KCGGILVLEG
601: RAKDTIVLAT GENVEPAELE EIASRSSLID QIMVIGQDRR RLGAIVVPNN NEALAAAKRK SSLDGNNDEA KDTVMNLLYD ELRTWMAGCS FQIGPILVVE
701: EPFTIDNGLM TPTMKIRRDR VAAKYQSEIE ALYE

Best Arabidopsis Sequence Match ( AT3G23790.1 )
(BLAST)

001: MASTSLGASI LVSHCSSAPE FQVSGMRLVF GYKAFGCRTS RRGFRVRCES KIQEKELRRC SPFLERLSLP REAALSSNEW KSVPDIWRSS VEKYGDRVAV
101: VDPYHDPPST FTYRQLEQEI LDFVEGLRVV GVKADEKIAL FADNSCRWLV ADQGIMATGA VNVVRGSRSS VEELLQIYCH SESVALVVDN PEFFNRIAES
201: FSYKAAPKFV ILLWGEKSSL VTAGRHTPVY SYNEIKKFGQ ERRAKFARSN DSGKYEYEYI DPDDIATIMY TSGTTGNPKG VMLTHQNLLH QIRNLSDFVP
301: AEAGERFLSM LPSWHAYERA CEYFIFTCGV EQKYTSIRFL KDDLKRYQPH YLISVPLVYE TLYSGIQKQI SASSPARKFL ALTLIKVSLA YTEMKRVYEG
401: LCLTKNQKPP MYIVSLVDWL WARVVAFFLW PLHMLAEKLV HRKIRSSIGI TKAGVSGGGS LPMHVDKFFE AIGVNVQNGY GLTETSPVVS ARRLRCNVLG
501: SVGHPIKDTE FKIVDHETGT VLPPGSKGIV KVRGPPVMKG YYKNPLATKQ VIDDDGWFNT GDMGWITPQH STGRSRSCGG VIVLEGRAKD TIVLSTGENV
601: EPLEIEEAAM RSNLIQQIVV IGQDQRRLGA IVIPNKEAAE GAAKQKISPV DSEVNELSKE TITSMVYEEL RKWTSQCSFQ VGPVLIVDEP FTIDNGLMTP
701: TMKIRRDKVV DQYKNEIERL YK

Arabidopsis Description

AAE16Probable acyl-activating enzyme 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LK39]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.