Factsheet for TraesCS7A01G115900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G110700.1	Wheat	peroxisome	98.73	95.85
TraesCS7B01G012700.1	Wheat	peroxisome	96.99	94.15
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	95.56	84.45
Os06t0158000-01	Rice	plasma membrane	76.7	78.7
OQU75859	Sorghum	peroxisome	79.4	77.2
KXG19348	Sorghum	peroxisome	78.76	76.58
Zm00001d045295_P001	Maize	extracellular	79.4	74.22
VIT_02s0025g01410.t01	Wine grape	peroxisome	66.56	63.44
Bra013735.1-P	Field mustard	peroxisome	62.6	63.4
KRH27846	Soybean	peroxisome	65.45	62.29
TraesCS5A01G148700.1	Wheat	peroxisome	65.61	62.07
KRH77642	Soybean	endoplasmic reticulum	65.77	61.85
CDY47618	Canola	peroxisome	64.98	61.47
CDY03515	Canola	peroxisome	64.82	61.32
AT4G23850.1	Thale cress	peroxisome	64.5	61.11
TraesCS3A01G237700.3	Wheat	peroxisome	64.98	61.1
Bra033159.1-P	Field mustard	peroxisome	58.48	61.09
PGSC0003DMT400000613	Potato	peroxisome	63.23	60.82
Solyc01g095750.2.1	Tomato	peroxisome	63.07	60.21
KRH60037	Soybean	peroxisome	62.76	59.55
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	62.76	59.55
Bra035259.1-P	Field mustard	peroxisome	62.76	59.46
CDX86825	Canola	peroxisome	62.76	59.46
AT4G11030.1	Thale cress	peroxisome	61.97	58.71
CDX94232	Canola	peroxisome	58.8	56.13
CDY25270	Canola	peroxisome	58.48	55.99
CDY40856	Canola	peroxisome	62.28	53.62
TraesCS5A01G411500.2	Wheat	golgi	54.68	51.96
CDY46530	Canola	peroxisome	63.07	50.64
Bra027700.1-P	Field mustard	peroxisome	63.55	48.55
KRH41306	Soybean	peroxisome	19.65	48.44
KRG94065	Soybean	vacuole	13.79	47.54
TraesCS1A01G075000.1	Wheat	golgi	48.02	45.22
CDY64879	Canola	peroxisome	63.55	41.77
TraesCS5A01G133200.2	Wheat	peroxisome	39.14	35.19
TraesCS4A01G184900.2	Wheat	peroxisome	38.51	34.91
TraesCS4A01G207000.1	Wheat	golgi	33.6	30.29
TraesCS5A01G117700.1	Wheat	endoplasmic reticulum, vacuole	32.96	29.8
TraesCS5A01G169600.1	Wheat	golgi	32.81	28.43
TraesCS4A01G336400.4	Wheat	plastid	25.2	21.66
TraesCS4A01G336500.2	Wheat	mitochondrion, plastid	25.2	21.4

Protein Annotations

EnsemblPlants:TraesCS7A01G115900.1	EnsemblPlantsGene:TraesCS7A01G115900	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF18	PFAM:PF00501
ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801	TIGR:cd05927	MapMan:50.6.2	:

Description

No Description!

Coordinates

chr7A:+:74138792..74156133

Molecular Weight (calculated)

69261.6 Da

IEP (calculated)

6.335

GRAVY (calculated)

-0.061

Length

631 amino acids

Sequence
(BLAST)

001: MKFLVESGGA EGNAGPSYRN VLAKDTGLLQ SPPGVDCLWD LFRASVEKYP SNPMLGHRPV VDGKAGDYAW MTYREVCDVV IKLAAAMSNS GVKQACNALG
101: VCCVPLYDTL GANAVEFITC HAELLIAFVE EKKIGELLKT CHATSKHLKT IVSLGGVTND QKEEAKNHGL SIFSWEEFLI TGGGEPVDLP EKKKSDICTI
201: MYTSGTTGDP KGVMISNESL LINLAGADSV VQSIGEPFDQ DDVYLSYLPL AHVFDRMFEE VFISHGSRIG FWRGDVKLLV DDIAALRPTV FCAVPRVLDR
301: IYSGLTTKIS AGGILKKTLF NLGYKMKLDS MKKGIKHEKA SPFFDKLVFS KVKERLGGKI RIIVSGGAPL AVAIEEFLRV VTCAHVVQGY GLTETCAGSF
401: AAIPNEFSMA GTVGPPVPHI DVRLESVSEM GYDALASIPR GEVCVKGSVL FSGYYKREDL TQEVLTDGWF HTGDVGEWQP NGALKIIDRK KNIFKLSQGE
501: YVAVENLENI YGVLPEIDSI WVYGNSFESF LIAVINPNQQ ALENWAGQNG ITGNLEELCE NAKTKEHFIA ELAKAAKEKK LKGFEFVRAV HLDAVPFDME
601: RDLITPTYKK KRPQMLKYYQ GAIDALYKSS K

Best Arabidopsis Sequence Match ( AT1G49430.1 )
(BLAST)

001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA

Arabidopsis Description

LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.