Factsheet for TraesCS7D01G110700.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G115900.1	Wheat	peroxisome	95.85	98.73
TraesCS7B01G012700.1	Wheat	peroxisome	97.38	97.38
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	96.46	87.82
Os06t0158000-01	Rice	plasma membrane	77.54	81.95
OQU75859	Sorghum	peroxisome	80.62	80.74
KXG19348	Sorghum	peroxisome	79.85	79.97
Zm00001d045295_P001	Maize	extracellular	80.77	77.78
Bra013735.1-P	Field mustard	peroxisome	63.54	66.29
VIT_02s0025g01410.t01	Wine grape	peroxisome	67.23	66.01
TraesCS3D01G237900.1	Wheat	peroxisome	66.77	65.96
KRH27846	Soybean	peroxisome	65.85	64.56
TraesCS5D01G144200.2	Wheat	peroxisome	66.15	64.47
CDY47618	Canola	peroxisome	66.15	64.47
CDY03515	Canola	peroxisome	66.0	64.32
Bra033159.1-P	Field mustard	peroxisome	59.69	64.24
AT4G23850.1	Thale cress	peroxisome	65.69	64.11
KRH77642	Soybean	endoplasmic reticulum	66.15	64.08
PGSC0003DMT400000613	Potato	peroxisome	63.69	63.11
Solyc01g095750.2.1	Tomato	peroxisome	63.54	62.48
Bra035259.1-P	Field mustard	peroxisome	63.85	62.31
CDX86825	Canola	peroxisome	63.85	62.31
KRH60037	Soybean	peroxisome	63.69	62.26
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	63.54	62.11
AT4G11030.1	Thale cress	peroxisome	62.92	61.41
CDX94232	Canola	peroxisome	60.0	59.0
CDY25270	Canola	peroxisome	59.69	58.88
CDY40856	Canola	peroxisome	63.38	56.21
KRH41306	Soybean	peroxisome	21.54	54.69
KRG94065	Soybean	vacuole	15.23	54.1
TraesCS5D01G420300.1	Wheat	golgi	54.46	53.47
CDY46530	Canola	peroxisome	64.0	52.93
Bra027700.1-P	Field mustard	peroxisome	64.46	50.73
TraesCS1D01G077600.1	Wheat	golgi	48.31	46.87
CDY64879	Canola	peroxisome	64.46	43.65
TraesCS5D01G141300.1	Wheat	peroxisome	39.38	36.47
TraesCS4D01G128700.3	Wheat	mitochondrion	38.62	36.06
TraesCS4D01G108300.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	33.85	31.56
TraesCS5D01G129800.1	Wheat	golgi	32.77	30.52
TraesCS5D01G174000.1	Wheat	peroxisome	32.62	29.12
TraesCS5D01G533800.3	Wheat	mitochondrion, plastid	25.54	22.46
TraesCS5D01G533700.1	Wheat	plastid	24.62	21.83

Protein Annotations

EnsemblPlants:TraesCS7D01G110700.1	EnsemblPlantsGene:TraesCS7D01G110700	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF18	PFAM:PF00501
ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801	TIGR:cd05927	MapMan:50.6.2	:

Description

No Description!

Coordinates

chr7D:-:66700669..66708957

Molecular Weight (calculated)

71276.9 Da

IEP (calculated)

6.127

GRAVY (calculated)

-0.050

Length

650 amino acids

Sequence
(BLAST)

001: MKFLVESGGA EGNAGPSYRN VLAKDTGLLQ SPPGVDCLWD LFRASVEKYP SNPMLGHRPV VDGKAGDYAW MTYREVCDVV IKLAASMSNS GVKQGERAGI
101: YGANCPEWII SMEACNALGV CCVPLYDTLG ANAVEFITCH AELLIAFVEE KKIGELLKTC HATSKYLKTI VSFGGVTNDQ KEEAKNHGLS IFSWEEFLIT
201: GGGEPVDLPE KKKSDICTIM YTSGTTGDPK GVMISNESLL INLAGADSVV QSIGEAFDQD DVYLSYLPLA HVFDRMFEEV FISHGSRIGF WRGDVKLLVD
301: DIAALRPTVF CAVPRVLDRI YSGLTTKISA GGILKKTLFN LGYKMKLDSM KKGIKHEKAS PFFDKLVFSK VKERLGGKIR IIVSGGAPLA VAVEEFLRVV
401: TCAHVVQGYG LTETCAGSFA AIPNEFSMAG TVGPPVPHID VRLESVSEMG YDALASIPRG EVCVKGSVLF SGYYKREDLT QEVLTDGWFH TGDVGEWQPN
501: GALKIIDRKK NIFKLSQGEY VAVENLENIY GVLPEIDSIW VYGNSFESFL IAVINPNQQA LENWAGQNGV TGSLAELCEN AKTKEHFIAE LAKAAKEKKL
601: KGFEFVRAVH LDAVPFDMER DLITPTYKKK RPQMLKYYQG AIDALYKSSK

Best Arabidopsis Sequence Match ( AT1G49430.1 )
(BLAST)

001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA

Arabidopsis Description

LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.